RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TRIM59Q8IWR1 403 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 WRNIP1Q96S55 665 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 MSH2P43246 934 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 LRP10Q7Z4F1 713 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 SSX2IPQ9Y2D8 614 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 FAM237AA0A1B0GTK4 181 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 LDHAP00338 332 aaKnown RBP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 TFRCP02786 760 aaKnown RBP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 RFX1P22670 979 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 CCDC38Q502W7 563 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 LMBRD2Q68DH5 695 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 DDX42Q86XP3 938 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 NME8Q8N427 588 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 ACTR5Q9H9F9 607 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 KIAA1586Q9HCI6 787 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 SEPT10Q9P0V9 454 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 TTC7AQ9ULT0 858 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 WDR91A4D1P6 747 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 A6NJR5 290 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 HERVK_113P62684 666 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 KLHDC7AQ5VTJ3 777 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 OR6B2Q6IFH4 312 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 CYFIP1Q7L576 1253 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 KCTD6Q8NC69 237 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 RNF169Q8NCN4 708 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 C1orf54Q8WWF1 131 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 SAYSD1Q9NPB0 183 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 ODF2LQ9ULJ1 636 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 FAM187AA6NFU0 413 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 RAD51CO43502 376 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 MMGT1Q8N4V1 131 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 TMEM35BQ8NCS4 154 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 TRIM51Q9BSJ1 452 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 ZWILCHQ9H900 591 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
SCAF1-201ENST00000360565 PFASO15067 1338 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 FIGNQ5HY92 759 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
SCAF1-201ENST00000360565 GJB7Q6PEY0 223 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 SRRM1Q8IYB3 904 aaKnown RBP17.5■□□□□ 0.39
SCAF1-201ENST00000360565 ARHGAP20Q9P2F6 1191 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 PCDHA10Q9Y5I2 948 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 MED24O75448 989 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 PPP1R37O75864 691 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 YWHABP31946 246 aaKnown RBP17.5■□□□□ 0.39
SCAF1-201ENST00000360565 SESN3P58005 492 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 DARS2Q6PI48 645 aaKnown RBP17.5■□□□□ 0.39
SCAF1-201ENST00000360565 NLRP14Q86W24 1093 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 PDIK1LQ8N165 341 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 CCHCR1Q8TD31 782 aa17.5■□□□□ 0.39
SCAF1-201ENST00000360565 THOC1Q96FV9 657 aaKnown RBP17.5■□□□□ 0.39
SCAF1-201ENST00000360565 DMGDHQ9UI17 866 aaKnown RBP17.5■□□□□ 0.39
SCAF1-201ENST00000360565 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
SCAF1-201ENST00000360565 TRIM68Q6AZZ1 485 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 PYROXD1Q8WU10 500 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 MED10Q9BTT4 135 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 HSPBP1Q9NZL4 362 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 ENTPD3O75355 529 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 STXBP2Q15833 593 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 RSRC2Q7L4I2 434 aaKnown RBP17.49■□□□□ 0.39
SCAF1-201ENST00000360565 TBC1D1Q86TI0 1168 aaPredicted RBP17.49■□□□□ 0.39
SCAF1-201ENST00000360565 INTS13Q9NVM9 706 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 MED7O43513 233 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 CYTH3O43739 400 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
SCAF1-201ENST00000360565 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
SCAF1-201ENST00000360565 OR2W6PQ8NHA6 318 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 WNT8AQ9H1J5 351 aa17.49■□□□□ 0.39
SCAF1-201ENST00000360565 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.49■□□□□ 0.39
SCAF1-201ENST00000360565 ARHGAP42A6NI28 874 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 TLR3O15455 904 aaKnown RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 TJP3O95049 919 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 MT-ND3P03897 115 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 PSMA2P25787 234 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 FAM47EQ6ZV65 393 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 CENPUQ71F23 418 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 SYT2Q8N9I0 419 aaPredicted RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 SLC30A5Q8TAD4 765 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 ZNF668Q96K58 619 aaPredicted RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 PABPN1LA6NDY0 278 aaKnown RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 SRLQ86TD4 932 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 KIAA0895Q8NCT3 520 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 RUBCNQ92622 972 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 ZIM3Q96PE6 472 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 NGRNQ9NPE2 291 aaKnown RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 MSH4O15457 936 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 PDE1BQ01064 536 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 ZNF667Q5HYK9 610 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 PAPD7Q5XG87 772 aaKnown RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 WDR93Q6P2C0 686 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 SYN2Q92777 582 aaPredicted RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 RPF1Q9H9Y2 349 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms