RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 APOBRQ0VD83 1088 aa6.84□□□□□ -1.31
CDC42SE2-201ENST00000360515 AP3B2Q13367 1082 aa6.84□□□□□ -1.31
CDC42SE2-201ENST00000360515 SH2B1Q9NRF2 756 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE2-201ENST00000360515 NCDNQ9UBB6 729 aa6.84□□□□□ -1.31
CDC42SE2-201ENST00000360515 MRPS17Q9Y2R5 130 aaKnown RBP6.84□□□□□ -1.31
CDC42SE2-201ENST00000360515 ESYT2A0FGR8 921 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 CNPP09543 421 aaKnown RBP6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 EIF4BP23588 611 aaKnown RBP6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 STAT5BP51692 787 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 MAP4K3Q8IVH8 894 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 COLGALT2Q8IYK4 626 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 VPS52Q8N1B4 723 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 STAG2Q8N3U4 1231 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 DCLK2Q8N568 766 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 FLCNQ8NFG4 579 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 OBP2AQ9NY56 170 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 CHURC1-FNTBB4DL54 471 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 CENPBP07199 599 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 ADH1AP07327 375 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 C7P10643 843 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 FGFR1P11362 822 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 MX1P20591 662 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 SPIRE1Q08AE8 756 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 ITGB3BPQ13352 177 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 SLC44A4Q53GD3 710 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 UNQ6494/PRO21346Q6UXR6 183 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 E2F7Q96AV8 911 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 TBC1D13Q9NVG8 400 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 ZDBF2Q9HCK1 2354 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 A0A0D9SFI3 127 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 DENND3A2RUS2 1198 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 CHRM1P11229 460 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 KLRC1P26715 233 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 MTMR1Q13613 665 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 PRSS36Q5K4E3 855 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 CHST3Q7LGC8 479 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 TMC7Q7Z402 723 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 FRAT1Q92837 279 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 SEMA4GQ9NTN9 838 aa6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 EVLQ9UI08 416 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-201ENST00000360515 HIP1O00291 1037 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 DKK1O94907 266 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 APPP05067 770 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 MYCLP12524 364 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 AXLP30530 894 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 HDAC1Q13547 482 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 NOMO2Q5JPE7 1267 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 SPEM1Q8N4L4 309 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 HCSTQ9UBK5 93 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 FBXL21Q9UKT6 434 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 SUPT16HQ9Y5B9 1047 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 CHD6Q8TD26 2715 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 BAHCC1Q9P281 2608 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 CCNE2O96020 404 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 SLC11A1P49279 550 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 PAN2Q504Q3 1202 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 ZBTB41Q5SVQ8 909 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 PGBD4Q96DM1 585 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 RIC8AQ9NPQ8 531 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 PTPRBP23467 1997 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 C5orf42Q9H799 3197 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 E9PAM4 449 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 KCNK5O95279 499 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 GNAQP50148 359 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 SETQ01105 290 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 UBXN11Q5T124 520 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 EP400NLQ6ZTU2 488 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 ZNF589Q86UQ0 364 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 C11orf74Q86VG3 221 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 ATRIPQ8WXE1 791 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 TMEM169Q96HH4 297 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 PI4K2AQ9BTU6 479 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 MAN1C1Q9NR34 630 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 KCNH7Q9NS40 1196 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 TBC1D22BQ9NU19 505 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 NUMBLQ9Y6R0 609 aa6.82□□□□□ -1.32
CDC42SE2-201ENST00000360515 SRRM3A6NNA2 597 aaPredicted RBP6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 GOLGA8HP0CJ92 632 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 TARSP26639 723 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 ALDH7A1P49419 539 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 LLGL2Q6P1M3 1020 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 TMEM173Q86WV6 379 aaPredicted RBP6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 EXOC8Q8IYI6 725 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 MIER1Q8N108 512 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 IGDCC4Q8TDY8 1250 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 PIK3R5Q8WYR1 880 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 PIGSQ96S52 555 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 MRPL17Q9NRX2 175 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 AGPAT5Q9NUQ2 364 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 MSRB2Q9Y3D2 182 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 RALGAPA1Q6GYQ0 2036 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 DMWDQ09019 674 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 HNRNPDQ14103 355 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 DGKKQ5KSL6 1271 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 ZNF852Q6ZMS4 543 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 LEMD2Q8NC56 503 aa6.81□□□□□ -1.32
CDC42SE2-201ENST00000360515 INO80BQ9C086 356 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms