RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 THOC5Q13769 683 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 CAPRIN2Q6IMN6 1127 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 SHC4Q6S5L8 630 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 ERICH1Q86X53 443 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 DNAAF3Q8N9W5 541 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 DEPDC1BQ8WUY9 529 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 ANKRD7Q92527 254 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 SNX24Q9Y343 169 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 INO80B-WBP1J3KQ70 363 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 PLSCR1O15162 318 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 TADA3O75528 432 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 NAALADL2Q58DX5 795 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 ACSL3O95573 720 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 ZBED1O96006 694 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 MYBL1P10243 752 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 EXOSC10Q01780 885 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 WDR75Q8IWA0 830 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 CCNYQ8ND76 341 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 GRAMD1AQ96CP6 724 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 KLC2Q9H0B6 622 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 ZRANB2O95218 330 aaKnown RBP eCLIP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 PRELPP51888 382 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 DYNLT1P63172 113 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 ART3Q13508 389 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 DHX34Q14147 1143 aaKnown RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 TFDP2Q14188 446 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 TRIP13Q15645 432 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 KNOP1Q1ED39 458 aaKnown RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 OR6B2Q6IFH4 312 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 XXYLT1Q8NBI6 393 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 PPWD1Q96BP3 646 aaKnown RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 TRIM62Q9BVG3 475 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 TRIM15Q9C019 465 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 CALB1P05937 261 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 CETPP11597 493 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 GFPT1Q06210 699 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 CTTNQ14247 550 aaKnown RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 SAYSD1Q9NPB0 183 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 CNOT8Q9UFF9 292 aaKnown RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 KRT38O76015 456 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 CDC27P30260 824 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 SYNPO2Q9UMS6 1093 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 MAFGO15525 162 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 GDF11O95390 407 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 FCER1AP12319 257 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-202ENST00000359526 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 SMYD2Q9NRG4 433 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 GJB4Q9NTQ9 266 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 STOML1Q9UBI4 398 aa13.04□□□□□ -0.32
DNMT1-202ENST00000359526 A0A1B0GTH6 734 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 ZNF449Q6P9G9 518 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 EPM2AIP1Q7L775 607 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 SFR1Q86XK3 245 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 FAM149B1Q96BN6 582 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 TRAIPQ9BWF2 469 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 DCP1AQ9NPI6 582 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 COPEO14579 308 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 SPAG7O75391 227 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 MAGOHP61326 146 aaKnown RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 FSCBQ5H9T9 825 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 PDXDC1Q6P996 788 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 PARP9Q8IXQ6 854 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 TMEM35BQ8NCS4 154 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 DHX38Q92620 1227 aaKnown RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 FAM84BQ96KN1 310 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 MSTO1Q9BUK6 570 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 MRPL40Q9NQ50 206 aaKnown RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 ADAM22Q9P0K1 906 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 RASA4BC9J798 803 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 RASA4O43374 803 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 TRPA1O75762 1119 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 IQCB1Q15051 598 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 NBPF15Q8N660 670 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 CHST13Q8NET6 341 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 TTC1Q99614 292 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 ANAPC7Q9UJX3 599 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms