RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KMT5AQ9NQR1 393 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 INTS13Q9NVM9 706 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 EXOC7Q9UPT5 735 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 GNEQ9Y223 722 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 COL1A2P08123 1366 aa15.21■□□□□ 0.02
PDLIM5-203ENST00000359265 CCDC169A6NNP5 214 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 LGALS16A8MUM7 142 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 SLC16A4O15374 487 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 SEPT4O43236 478 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 DUSP11O75319 330 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 PPFIA4O75335 1185 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 MAFO75444 373 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 NR3C1P04150 777 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 PRKCSHP14314 528 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 SCP2P22307 547 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 PTGS1P23219 599 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 NR2F2P24468 414 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 NPTX2P47972 431 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 CPT1AP50416 773 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 GSDMDP57764 484 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 GTF2BQ00403 316 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 CACNB2Q08289 660 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 DGKDQ16760 1214 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 CCDC40Q4G0X9 1142 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 FAM109BQ6ICB4 259 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 FILIP1Q7Z7B0 1213 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 SYCP3Q8IZU3 236 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 TCP11Q8WWU5 503 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 TUBGCP2Q9BSJ2 902 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 VPS16Q9H269 839 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 SPC25Q9HBM1 224 aa15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 RTN4Q9NQC3 1192 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 CGNQ9P2M7 1197 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-203ENST00000359265 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 ELNP15502 786 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 CNGA1P29973 690 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 ADAM9Q13443 819 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 MAN2A1Q16706 1144 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 ZNF484Q5JVG2 852 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 CCDC186Q7Z3E2 898 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 BSNDQ8WZ55 320 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 DEFB118Q96PH6 123 aa15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 NTPCRQ9BSD7 190 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 UBE2OQ9C0C9 1292 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-203ENST00000359265 A6NJR5 290 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 PES1O00541 588 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 SLC16A3O15427 465 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 DYNC1LI2O43237 492 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 ADCY6O43306 1168 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 ZNF286BP0CG31 522 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 RARBP10826 455 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 ARL2P36404 184 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 NAMPTP43490 491 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 DNM2P50570 870 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 MARSP56192 900 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 KCNA1Q09470 495 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 IER5Q5VY09 327 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 SPECC1LQ69YQ0 1117 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 CCDC150Q8NCX0 1101 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 TMEM161BQ8NDZ6 487 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 TRPV1Q8NER1 839 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 MAFAQ8NHW3 353 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 TMEM143Q96AN5 459 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 EEF2KMTQ96G04 330 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 CDX2Q99626 313 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 C16orf70Q9BSU1 422 aa15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 NOC4LQ9BVI4 516 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 LAMA2P24043 3122 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-203ENST00000359265 ITIH6Q6UXX5 1313 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 DENND3A2RUS2 1198 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 ZBTB42B2RXF5 422 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 H3BRB1 525 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 TEX33O43247 280 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 MSCO60682 206 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 EPB41P11171 864 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 GLRA2P23416 452 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 UBXN1Q04323 297 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 MYBPC2Q14324 1141 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 FKBP15Q5T1M5 1219 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 MAP4K3Q8IVH8 894 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 KSR1Q8IVT5 923 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 DEPTORQ8TB45 409 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 KCNN1Q92952 543 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 CRISPLD2Q9H0B8 497 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 TUT1Q9H6E5 874 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 METTL14Q9HCE5 456 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 AGPAT3Q9NRZ7 376 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 TBX20Q9UMR3 447 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 FRMPD3Q5JV73 1810 aa15.17■□□□□ 0.02
PDLIM5-203ENST00000359265 IGKV6-21A0A0C4DH24 114 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 A0A1W2PQC6 194 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 LRRIQ4A6NIV6 560 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 TNFRSF10AO00220 468 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 CLIC2O15247 247 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 MAGEB2O15479 319 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 ZEB2O60315 1214 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms