RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 GUCA1BQ9UMX6 200 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 NFASCO94856 1347 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 EIF3CLB5ME19 914 aaKnown RBP13.79□□□□□ -0.2
GGPS1-202ENST00000358966 URI1O94763 535 aaPredicted RBP13.79□□□□□ -0.2
GGPS1-202ENST00000358966 GNA14O95837 355 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 AFPP02771 609 aaKnown RBP13.79□□□□□ -0.2
GGPS1-202ENST00000358966 TCF7P36402 384 aaPredicted RBP13.79□□□□□ -0.2
GGPS1-202ENST00000358966 ARHGAP29Q52LW3 1261 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 CST9Q5W186 159 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 MIS18BP1Q6P0N0 1132 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 KCTD17Q8N5Z5 321 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 EIF3CQ99613 913 aaKnown RBP13.79□□□□□ -0.2
GGPS1-202ENST00000358966 SENP7Q9BQF6 1050 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 NUP58Q9BVL2 599 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 GCNT4Q9P109 453 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 LRRC37A2A6NM11 1700 aa13.79□□□□□ -0.2
GGPS1-202ENST00000358966 RPL13P26373 211 aaKnown RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 EIF4A3P38919 411 aaKnown RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 RAPGEF1Q13905 1077 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 TDRD12Q587J7 1177 aaKnown RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 FOXR2Q6PJQ5 311 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 MMS22LQ6ZRQ5 1243 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 TMEM161BQ8NDZ6 487 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 CEP89Q96ST8 783 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 MLXIPQ9HAP2 919 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 PON1P27169 355 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 ADSSP30520 456 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 SSR1P43307 286 aaKnown RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 DMP1Q13316 513 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 ZNF569Q5MCW4 686 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 TRAPPC12Q8WVT3 735 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 PPM1EQ8WY54 764 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 PLAGL2Q9UPG8 496 aa13.78□□□□□ -0.2
GGPS1-202ENST00000358966 ZC3H4Q9UPT8 1303 aaKnown RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 MKI67P46013 3256 aaKnown RBP13.78□□□□□ -0.2
GGPS1-202ENST00000358966 DNAJC25-GNG10A0A024R161 153 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.2
GGPS1-202ENST00000358966 POLGP54098 1239 aaPredicted RBP13.77□□□□□ -0.2
GGPS1-202ENST00000358966 GFPT1Q06210 699 aaPredicted RBP13.77□□□□□ -0.2
GGPS1-202ENST00000358966 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 ERCC6LQ2NKX8 1250 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 DPY19L2P1Q6NXN4 242 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 PDXDC1Q6P996 788 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 RETREG2Q8NC44 543 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 GANQ9H2C0 597 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 KMT5AQ9NQR1 393 aa13.77□□□□□ -0.2
GGPS1-202ENST00000358966 ZNHIT6Q9NWK9 470 aaKnown RBP13.77□□□□□ -0.2
GGPS1-202ENST00000358966 STAM2O75886 525 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 SLC25A27O95847 323 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 GJB1P08034 283 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 ADORA2AP29274 412 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 ICAM3P32942 547 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 EMC2Q15006 297 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 FIGNQ5HY92 759 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 SLC39A4Q6P5W5 647 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 OTUD6AQ7L8S5 288 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 CBWD2Q8IUF1 395 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 SLC35F6Q8N357 371 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 POP1Q99575 1024 aaKnown RBP13.77□□□□□ -0.21
GGPS1-202ENST00000358966 MAFBQ9Y5Q3 323 aaPredicted RBP13.77□□□□□ -0.21
GGPS1-202ENST00000358966 A0A1W2PQJ5 194 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 CCP110O43303 1012 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 SLU7O95391 586 aaKnown RBP13.77□□□□□ -0.21
GGPS1-202ENST00000358966 OATP04181 439 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 ADRB2P07550 413 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 SCP2P22307 547 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 LMAN1P49257 510 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 HGSNATQ68CP4 663 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 TAS1R3Q7RTX0 852 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 ASAP3Q8TDY4 903 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 GLG1Q92896 1179 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 DMAC2Q9NW81 257 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 HSPBP1Q9NZL4 362 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 TBX20Q9UMR3 447 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 FRMD4BQ9Y2L6 1034 aa13.77□□□□□ -0.21
GGPS1-202ENST00000358966 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 ENC1O14682 589 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 EDN1P05305 212 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 UCHL3P15374 230 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 KIF11P52732 1056 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 NCKAP1LP55160 1127 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 GTF2BQ00403 316 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 LRRC71Q8N4P6 559 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 GPRC5AQ8NFJ5 357 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 RDM1Q8NG50 284 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
GGPS1-202ENST00000358966 MYH10P35580 1976 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 OAS2P29728 719 aaKnown RBP13.76□□□□□ -0.21
GGPS1-202ENST00000358966 GCLMP48507 274 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms