RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SF3B3Q15393 1217 aaKnown RBP14.66□□□□□ -0.06
VCP-201ENST00000358901 ETNK1Q9HBU6 452 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 PCSK1NQ9UHG2 260 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 STXBP3O00186 592 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 FGFR4P22455 802 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 PLA2G4AP47712 749 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 CAV1Q03135 178 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 SURF1Q15526 300 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 CEP55Q53EZ4 464 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 AP1ARQ63HQ0 302 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 OR2W6PQ8NHA6 318 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 RPS6KC1Q96S38 1066 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 TRIM51Q9BSJ1 452 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 GOLPH3Q9H4A6 298 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 FIS1Q9Y3D6 152 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 HEY1Q9Y5J3 304 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 LMTK2Q8IWU2 1503 aa14.66□□□□□ -0.06
VCP-201ENST00000358901 CEP152O94986 1710 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 KLRC1P26715 233 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 PRPSAP1Q14558 356 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 Q3C1V9 767 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 LRRC37BQ96QE4 947 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 WNT8AQ9H1J5 351 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 KIAA1586Q9HCI6 787 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 USH1CQ9Y6N9 552 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 PFASO15067 1338 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 DLC1Q96QB1 1528 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 EIF3HO15372 352 aaKnown RBP eCLIP14.65□□□□□ -0.065e-6■□□□□ 8.9
VCP-201ENST00000358901 CYP26A1O43174 497 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 IRAK1P51617 712 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 KRT76Q01546 638 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 MYO1EQ12965 1108 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 GPS1Q13098 491 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 DHX34Q14147 1143 aaKnown RBP14.65□□□□□ -0.06
VCP-201ENST00000358901 DPP9Q86TI2 863 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 SEPT12Q8IYM1 358 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 DCPSQ96C86 337 aaKnown RBP14.65□□□□□ -0.06
VCP-201ENST00000358901 TGS1Q96RS0 853 aaKnown RBP14.65□□□□□ -0.06
VCP-201ENST00000358901 PNKPQ96T60 521 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 AGPAT1Q99943 283 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 ATP6V0A4Q9HBG4 840 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 SPC25Q9HBM1 224 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 FHOD1Q9Y613 1164 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 CFLARO15519 480 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 RASA1P20936 1047 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 ERVK-24P63145 666 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 ST3GAL1Q11201 340 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 DDX42Q86XP3 938 aaKnown RBP eCLIP14.65□□□□□ -0.06
VCP-201ENST00000358901 GABBR1Q9UBS5 961 aa14.65□□□□□ -0.06
VCP-201ENST00000358901 H2AFXP16104 143 aaPredicted RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 TOB1P50616 345 aaPredicted RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 POLE2P56282 527 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 KIAA1755Q5JYT7 1200 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 TMCO4Q5TGY1 634 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 ATG16L1Q676U5 607 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 SPOPLQ6IQ16 392 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 FBXL13Q8NEE6 735 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 DDX27Q96GQ7 796 aaKnown RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 REEP2Q9BRK0 252 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 FUT8Q9BYC5 575 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 PDS5AQ29RF7 1337 aaKnown RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 MAP3K7O43318 606 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 PLEKP08567 350 aaPredicted RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 NR1H3Q13133 447 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 BYSLQ13895 437 aaKnown RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 TFDP2Q14188 446 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 NCAPHQ15003 741 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 KRT27Q7Z3Y8 459 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 FLT1P17948 1338 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 MAPK6Q16659 721 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 SUPT20HL1Q3ZLR7 823 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 CRLF3Q8IUI8 442 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 RHOT1Q8IXI2 618 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 SLC35G2Q8TBE7 412 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 DEPDC1BQ8WUY9 529 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 LRGUKQ96M69 825 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 EHD2Q9NZN4 543 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 GGT7Q9UJ14 662 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 DAGLAQ9Y4D2 1042 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 PALM3A6NDB9 673 aaPredicted RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 SWSAP1Q6NVH7 229 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 ARHGAP27Q6ZUM4 889 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 WDR75Q8IWA0 830 aaKnown RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 ELOA2Q8IYF1 753 aaPredicted RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 TTC13Q8NBP0 860 aa14.64□□□□□ -0.07
VCP-201ENST00000358901 HNRNPLLQ8WVV9 542 aaKnown RBP14.64□□□□□ -0.07
VCP-201ENST00000358901 RAD51CO43502 376 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 CAMTA2O94983 1202 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 GNA15P30679 374 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 SEC24CP53992 1094 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 SH3BGRP55822 239 aaPredicted RBP14.63□□□□□ -0.07
VCP-201ENST00000358901 EPHA7Q15375 998 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 IZUMO3Q5VZ72 239 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 FBXW10Q5XX13 1052 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 EXOC8Q8IYI6 725 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 PPM1NQ8N819 430 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 KCNV2Q8TDN2 545 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 ANKS1AQ92625 1134 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 ZIM3Q96PE6 472 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms