RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CACNB3P54284 484 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 CYP4A11Q02928 519 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 KCNA1Q09470 495 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 SLMAPQ14BN4 828 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 SNCBQ16143 134 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 PTPROQ16827 1216 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 ZNF720Q7Z2F6 126 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 FUKQ8N0W3 1084 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 CCDC197Q8NCU1 140 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 PI4KBQ9UBF8 816 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 SIPA1L1O43166 1804 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 MTA2O94776 668 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 SCTRP47872 440 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 SNAP25P60880 206 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 PRPF4BQ13523 1007 aaKnown RBP19.13■□□□□ 0.65
RTN4-204ENST00000357732 SYDE2Q5VT97 1194 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 TATDN1Q6P1N9 297 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 CYB5D1Q6P9G0 228 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 PARP9Q8IXQ6 854 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 ZNF317Q96PQ6 595 aaPredicted RBP19.13■□□□□ 0.65
RTN4-204ENST00000357732 TAOK3Q9H2K8 898 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 AGPAT3Q9NRZ7 376 aa19.13■□□□□ 0.65
RTN4-204ENST00000357732 IGSF9BQ9UPX0 1349 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 IGLV3-22A0A075B6J6 115 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 DCDC2CA8MYV0 355 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 DNM1LO00429 736 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 CTNND1O60716 968 aaKnown RBP19.12■□□□□ 0.65
RTN4-204ENST00000357732 CAND2O75155 1236 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 CTNNA2P26232 953 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 ZNF76P36508 570 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 PREPLQ4J6C6 727 aaPredicted RBP19.12■□□□□ 0.65
RTN4-204ENST00000357732 WLSQ5T9L3 541 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 ZKSCAN4Q969J2 545 aaPredicted RBP19.12■□□□□ 0.65
RTN4-204ENST00000357732 FIZ1Q96SL8 496 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 AGPAT1Q99943 283 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 THAP2Q9H0W7 228 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 NR2E1Q9Y466 385 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 PCDHAC2Q9Y5I4 1007 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 ABCB4P21439 1286 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 CETN1Q12798 172 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 TCP10Q12799 353 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 BFSP1Q12934 665 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 ZDHHC24Q6UX98 284 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 OTOP1Q7RTM1 612 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 FAM178BQ8IXR5 827 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 GJD4Q96KN9 370 aaPredicted RBP19.12■□□□□ 0.65
RTN4-204ENST00000357732 ZDHHC15Q96MV8 337 aa19.12■□□□□ 0.65
RTN4-204ENST00000357732 F5H6K3 240 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 EML1O00423 815 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 PTGIRP43119 386 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 ICA1Q05084 483 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 ALCAMQ13740 583 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 CTTNQ14247 550 aaKnown RBP19.11■□□□□ 0.65
RTN4-204ENST00000357732 CYP1B1Q16678 543 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 CBWD6Q4V339 395 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 CBWD3Q5JTY5 395 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 CBWD5Q5RIA9 395 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 ARHGEF26Q96DR7 871 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 NACC1Q96RE7 527 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 WNT8AQ9H1J5 351 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 ALG6Q9Y672 507 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 RGS16O15492 202 aaPredicted RBP19.11■□□□□ 0.65
RTN4-204ENST00000357732 PSMD10O75832 226 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 SLITRK3O94933 977 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 NMT1P30419 496 aaKnown RBP19.11■□□□□ 0.65
RTN4-204ENST00000357732 SLC8A1P32418 973 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 CYFIP1Q7L576 1253 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 PIGWQ7Z7B1 504 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 PROCA1Q8NCQ7 364 aaPredicted RBP19.11■□□□□ 0.65
RTN4-204ENST00000357732 ATXN2LQ8WWM7 1075 aaKnown RBP19.11■□□□□ 0.65
RTN4-204ENST00000357732 ZSWIM1Q9BR11 485 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 IDI2Q9BXS1 227 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 TRIM31Q9BZY9 425 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 NSRP1Q9H0G5 558 aaKnown RBP19.11■□□□□ 0.65
RTN4-204ENST00000357732 GRHL1Q9NZI5 618 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 PNMA2Q9UL42 364 aa19.11■□□□□ 0.65
RTN4-204ENST00000357732 CCT8L1PA6NM43 557 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 MMEP08473 750 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 CHN1P15882 459 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 NEDD9Q14511 834 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 TNFAIP8L3Q5GJ75 292 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 TAOK1Q7L7X3 1001 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 ALG3Q92685 438 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 SLC5A5Q92911 643 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 HVCN1Q96D96 273 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 JPH2Q9BR39 696 aaPredicted RBP19.1■□□□□ 0.65
RTN4-204ENST00000357732 ROPN1BQ9BZX4 212 aaPredicted RBP19.1■□□□□ 0.65
RTN4-204ENST00000357732 ROPN1Q9HAT0 212 aaPredicted RBP19.1■□□□□ 0.65
RTN4-204ENST00000357732 GOPCQ9HD26 462 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 ERVK-5Q9HDB9 667 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 RGL1Q9NZL6 768 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 TRPC6Q9Y210 931 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 ALAS1P13196 640 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 TAL1P17542 331 aaPredicted RBP19.1■□□□□ 0.65
RTN4-204ENST00000357732 PRELPP51888 382 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 PLTPP55058 493 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 GPC5P78333 572 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 SEL1L2Q5TEA6 688 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 MFSD5Q6N075 450 aa19.1■□□□□ 0.65
RTN4-204ENST00000357732 INTS8Q75QN2 995 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms