RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 USP17L11C9JVI0 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L18D6R9N7 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L22D6RA61 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L17D6RBQ6 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L19D6RCP7 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L20D6RJB6 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 UPP2O95045 317 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 ALADP13716 330 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 CREB1P16220 341 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 HSPA6P17066 643 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 SLC16A2P36021 539 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 KCNJ1P48048 391 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 PSMC6P62333 389 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L24Q0WX57 530 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 GIT2Q14161 759 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 ASPRV1Q53RT3 343 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 HYIQ5T013 277 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 AP1ARQ63HQ0 302 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 USP17L6PQ6QN14 398 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 SAMD1Q6SPF0 538 aaPredicted RBP8.27□□□□□ -1.09
CD46-204ENST00000357714 CLEC10AQ8IUN9 316 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 FITM2Q8N6M3 262 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 KRT35Q92764 455 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 PLCD4Q9BRC7 762 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 SLC5A4Q9NY91 659 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 MTUS1Q9ULD2 1270 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 NCANO14594 1321 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 COL4A1P02462 1669 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 SFI1A8K8P3 1242 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 LUC7L3O95232 432 aaKnown RBP8.27□□□□□ -1.09
CD46-204ENST00000357714 VCAM1P19320 739 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 ATP5DP30049 168 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 PTGIRP43119 386 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 MARCKSL1P49006 195 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 SLC12A3P55017 1021 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 KCNA1Q09470 495 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 SNX1Q13596 522 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 MESDQ14696 234 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 FAM186BQ8IYM0 893 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 ERMNQ8TAM6 284 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 FBF1Q8TES7 1133 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 STK33Q9BYT3 514 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 DNAJC17Q9NVM6 304 aaKnown RBP8.27□□□□□ -1.09
CD46-204ENST00000357714 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.27□□□□□ -1.093e-6■■■□□ 15.7
CD46-204ENST00000357714 ADAM22Q9P0K1 906 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 CHORDC1Q9UHD1 332 aaPredicted RBP8.27□□□□□ -1.09
CD46-204ENST00000357714 PASKQ96RG2 1323 aa8.27□□□□□ -1.09
CD46-204ENST00000357714 ANKRD62A6NC57 917 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 RSPH10B2B2RC85 870 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 MPHOSPH10O00566 681 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.092e-8■□□□□ 9.9
CD46-204ENST00000357714 RSPH10BP0C881 870 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 MYBL1P10243 752 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 BRAFP15056 766 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 PPP4CP60510 307 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 CYP4A11Q02928 519 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 TTBK2Q6IQ55 1244 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 MIS18BP1Q6P0N0 1132 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 TTC27Q6P3X3 843 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 VSIG1Q86XK7 387 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 CATSPER3Q86XQ3 398 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 PALB2Q86YC2 1186 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 ADGRF4Q8IZF3 695 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 SLC30A5Q8TAD4 765 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 TBC1D16Q8TBP0 767 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 TGS1Q96RS0 853 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 PAIP2Q9BPZ3 127 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 DDX23Q9BUQ8 820 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 TMEM109Q9BVC6 243 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 JMJD4Q9H9V9 463 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 RXFP1Q9HBX9 757 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 ARHGEF3Q9NR81 526 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 COG5Q9UP83 839 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 PFASO15067 1338 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 FOXO6A8MYZ6 492 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 MIF4GDA9UHW6 222 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 O00370 1275 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 SLC16A3O15427 465 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 HOXD13P35453 343 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 PCK1P35558 622 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 GALNTL6Q49A17 601 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 PRR16Q569H4 304 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 INTS8Q75QN2 995 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 NBPF5PQ86XG9 351 aaPredicted RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 RHOT2Q8IXI1 618 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 NAF1Q96HR8 494 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 RMDN2Q96LZ7 410 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 NAP1L4Q99733 375 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 ROPN1BQ9BZX4 212 aaPredicted RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 BHMT2Q9H2M3 363 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 CDC42EP4Q9H3Q1 356 aaKnown RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 ROPN1Q9HAT0 212 aaPredicted RBP8.26□□□□□ -1.09
CD46-204ENST00000357714 USP40Q9NVE5 1235 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 NKIRAS1Q9NYS0 192 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 ASIC3Q9UHC3 531 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 TBK1Q9UHD2 729 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 ATP8B3O60423 1300 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 ANKRD63C9JTQ0 380 aa8.26□□□□□ -1.09
CD46-204ENST00000357714 SPOPO43791 374 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms