RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 VPS52Q8N1B4 723 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 REXO1Q8N1G1 1221 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 FBXL16Q8N461 479 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 SLC5A5Q92911 643 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 TMEM169Q96HH4 297 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 RIT2Q99578 217 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 NIFKQ9BYG3 293 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 WDR70Q9NW82 654 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 LIMD1Q9UGP4 676 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 FRYLO94915 3013 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 DMXL1Q9Y485 3027 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 PRR23AA6NEV1 266 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 MSH4O15457 936 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 LILRB3O75022 631 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 CSDE1O75534 798 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 ASGR2P07307 311 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 HMGB1P09429 215 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 SKIP12755 728 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 FGFR4P22455 802 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 SFNP31947 248 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 METAP2P50579 478 aaKnown RBP eCLIP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 PRKCEQ02156 737 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 TBC1D8BQ0IIM8 1120 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 DRP2Q13474 957 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 KRT32Q14532 448 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 NTRK3Q16288 839 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 RARS2Q5T160 578 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 KANK3Q6NY19 840 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 B3GNT9Q6UX72 402 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 TMEM173Q86WV6 379 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 C12orf76Q8N812 135 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 TDRD5Q8NAT2 981 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 RNF169Q8NCN4 708 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 RDM1Q8NG50 284 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 BICD2Q8TD16 824 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 KCNB2Q92953 911 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZNF668Q96K58 619 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 GCOM2Q9BZD3 368 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 SMOC2Q9H3U7 446 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 NRDE2Q9H7Z3 1164 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 CYP26B1Q9NR63 512 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 TCEAL9Q9UHQ7 104 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 DOCK8Q8NF50 2099 aa9.67□□□□□ -0.86
COL4A3BP-202ENST00000357457 NID2Q14112 1375 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 CYP3A7-CYP3A51PA0A087WV96 503 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 OFD1O75665 1012 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 PSMD10O75832 226 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 WEE2P0C1S8 567 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 EPCAMP16422 314 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 CYP3A7P24462 503 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 JAK3P52333 1124 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 UGCGQ16739 394 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 XKR3Q5GH77 459 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 BMP2KLQ5H9B9 411 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 GPR149Q86SP6 731 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 PPFIBP1Q86W92 1011 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 NLRP7Q8WX94 980 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 AUTS2Q8WXX7 1259 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 VN1R3Q9BXE9 311 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 AGXT2Q9BYV1 514 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 INO80BQ9C086 356 aaPredicted RBP9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 UNC45AQ9H3U1 944 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 TBC1D13Q9NVG8 400 aa9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 DBR1Q9UK59 544 aaKnown RBP9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 MTCL1Q9Y4B5 1905 aaKnown RBP9.66□□□□□ -0.86
COL4A3BP-202ENST00000357457 A0A087WZ62 844 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 GAS7O60861 476 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZC3H11AO75152 810 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 MAFO75444 373 aaPredicted RBP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 NPR3P17342 541 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 PTPN14Q15678 1187 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 Q4G0T1 1027 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 GLB1LQ6UWU2 654 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 MRPL10Q7Z7H8 261 aaKnown RBP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 CABP7Q86V35 215 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZNF410Q86VK4 478 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 FEZF2Q8TBJ5 459 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 BCL7CQ8WUZ0 217 aaPredicted RBP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 LPPQ93052 612 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 ACSF2Q96CM8 615 aaPredicted RBP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 CCDC136Q96JN2 1154 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 YTHDC1Q96MU7 727 aaKnown RBP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 KLHL5Q96PQ7 755 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 FDXACB1Q9BRP7 624 aaPredicted RBP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 TEKT3Q9BXF9 490 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 RNF26Q9BY78 433 aaPredicted RBP9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 RHOBTB2Q9BYZ6 727 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 SCUBE2Q9NQ36 999 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 FAM105AQ9NUU6 356 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 STK39Q9UEW8 545 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 CACNA1IQ9P0X4 2223 aa9.65□□□□□ -0.86
COL4A3BP-202ENST00000357457 CACNA1AO00555 2505 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms