RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 P4HBP07237 508 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 RPSAP08865 295 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 CXCR5P32302 372 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 RBBP7Q16576 425 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 LRRC23Q53EV4 343 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 RCSD1Q6JBY9 416 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 THNSL1Q8IYQ7 743 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ASAP3Q8TDY4 903 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 SH3KBP1Q96B97 665 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 RMDN3Q96TC7 470 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PUS7LQ9H0K6 701 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 SEC31BQ9NQW1 1179 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 TLR7Q9NYK1 1049 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 STOML1Q9UBI4 398 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 NFU1Q9UMS0 254 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 G3BP2Q9UN86 482 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 ASB14A6NK59 587 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 GOLGA8TH3BQL2 631 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 CCDC22O60826 627 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 HAUS5O94927 633 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 HOXA13P31271 388 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 ABCE1P61221 599 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 NR5A1Q13285 461 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 TMED1Q13445 227 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 KRT72Q14CN4 511 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 STILQ15468 1287 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 TBC1D10BQ4KMP7 808 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 SARM1Q6SZW1 724 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 SYDE1Q6ZW31 735 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 SCN4BQ8IWT1 228 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 YAF2Q8IY57 180 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 AFG1LQ8WV93 481 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 GRAMD1AQ96CP6 724 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 SNF8Q96H20 258 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ZMAT2Q96NC0 199 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 EGFL8Q99944 293 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 SLC7A5P2Q9GIP4 190 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 BFARQ9NZS9 450 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 SELENONQ9NZV5 590 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PCDHGB4Q9UN71 923 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 POLIQ9UNA4 740 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 KAT6BQ8WYB5 2073 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 CDC42BPGQ6DT37 1551 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PRKAB2O43741 272 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PALMO75781 387 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 CYP2E1P05181 493 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 CRKP46108 304 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 KCNA1Q09470 495 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 MIGA2Q7L4E1 593 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ARHGAP18Q8N392 663 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ATP11CQ8NB49 1132 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ZNF564Q8TBZ8 553 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 PPP2R3CQ969Q6 453 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 OPTNQ96CV9 577 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 DYNLL2Q96FJ2 89 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 BTBD6Q96KE9 485 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PLEKHF1Q96S99 279 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 MMP19Q99542 508 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 EHD2Q9NZN4 543 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 TTC37Q6PGP7 1564 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 STK25O00506 426 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 CYBBP04839 570 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 STAT3P40763 770 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PMS2P54278 862 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 NFX1Q12986 1120 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 GTF2H3Q13889 308 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ACBD5Q5T8D3 534 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 ANO5Q75V66 913 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 GRAMD1CQ8IYS0 662 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 OLFM3Q96PB7 478 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PPP1R16BQ96T49 567 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 VPS11Q9H270 941 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ZC4H2Q9NQZ6 224 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 CDK12Q9NYV4 1490 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 ZNF263O14978 683 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 HNRNPRO43390 633 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 ADRA2BP18089 450 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 GNA15P30679 374 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 SERPINB4P48594 390 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 VAMP7P51809 220 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 EFNA5P52803 228 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PSMC5P62195 406 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PRAMEP78395 509 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 E2F5Q15329 346 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 KHDRBS2Q5VWX1 349 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 HIBCHQ6NVY1 386 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 C16orf87Q6PH81 154 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 MTHFD1LQ6UB35 978 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 TMEM270Q6UE05 265 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 RRM2BQ7LG56 351 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 RHOT1Q8IXI2 618 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 PPHLN1Q8NEY8 458 aaKnown RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 ABTB1Q969K4 478 aaPredicted RBP6.87□□□□□ -1.31
UPF2-201ENST00000356352 FOPNLQ96NB1 174 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 USP6P35125 1406 aa6.87□□□□□ -1.31
UPF2-201ENST00000356352 ARHGAP10A1A4S6 786 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms