RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 AGPAT5Q9NUQ2 364 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 SNX5Q9Y5X3 404 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 RNF103-CHMP3A0A140T963 221 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 E9PMD0 336 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 NEMP1O14524 444 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 NPY2RP49146 381 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 ADCK1Q86TW2 530 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 STX19Q8N4C7 294 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 EPAS1Q99814 870 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 EMILIN3Q9NT22 766 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 LMTK3Q96Q04 1460 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 CYP2D7A0A087X1C5 515 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 HDAC4P56524 1084 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 FLOT2Q14254 428 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 RINT1Q6NUQ1 792 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 ZNF790Q6PG37 636 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 RSRC2Q7L4I2 434 aaKnown RBP8.37□□□□□ -1.07
VANGL1-202ENST00000355485 SIX5Q8N196 739 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 ENAHQ8N8S7 591 aaPredicted RBP8.37□□□□□ -1.07
VANGL1-202ENST00000355485 RNF25Q96BH1 459 aaPredicted RBP8.37□□□□□ -1.07
VANGL1-202ENST00000355485 COA7Q96BR5 231 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 CLMNQ96JQ2 1002 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 ANKZF1Q9H8Y5 726 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 MARCOQ9UEW3 520 aaPredicted RBP8.37□□□□□ -1.07
VANGL1-202ENST00000355485 MAST1Q9Y2H9 1570 aa8.37□□□□□ -1.07
VANGL1-202ENST00000355485 MRPS35P82673 323 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 HIC1Q14526 733 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 RCN1Q15293 331 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 FAM178BQ8IXR5 827 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 EFHBQ8N7U6 833 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KLF6Q99612 283 aaPredicted RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 CLASP1Q7Z460 1538 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 RFC5P40937 340 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ZNF746Q6NUN9 644 aaPredicted RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 GADL1Q6ZQY3 521 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ANKS3Q6ZW76 656 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KCTD6Q8NC69 237 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ABCF3Q9NUQ8 709 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 TBC1D23Q9NUY8 699 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 STX18Q9P2W9 335 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ARHGAP31Q2M1Z3 1444 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 SAMD9Q5K651 1589 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KIAA0556O60303 1618 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 CCDC188H7C350 402 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 DGKIO75912 1065 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 VHLP40337 213 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 OVGP1Q12889 678 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 PDIA2Q13087 525 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ZBED8Q8IZ13 594 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 MYCBPAPQ8TBZ2 947 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 MIEF2Q96C03 454 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 FAM81BQ96LP2 452 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KLHL11Q9NVR0 708 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 REREQ9P2R6 1566 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 GRID2IPA4D2P6 1211 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 SLC4A1P02730 911 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 MAP4P27816 1152 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ALDH1B1P30837 517 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KCNB1Q14721 858 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 RABGAP1LQ5R372 815 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 LRIG3Q6UXM1 1119 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 PASD1Q8IV76 773 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 AGGF1Q8N302 714 aaeCLIP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 PNMA1Q8ND90 353 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 TBCKQ8TEA7 893 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 LPIN2Q92539 896 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 MOV10L1Q9BXT6 1211 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 VPS11Q9H270 941 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ADNPQ9H2P0 1102 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ZSWIM5Q9P217 1185 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 DNAJC12Q9UKB3 198 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 FLT4P35916 1363 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KRT8P05787 483 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KRT17Q04695 432 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KLHL25Q9H0H3 589 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 CLCA2Q9UQC9 943 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 PLEKHG2Q9H7P9 1386 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 KLRF2D3W0D1 207 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 FAM107AO95990 144 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 GYG1P46976 350 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 TRAPPC10P48553 1259 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 DPP8Q6V1X1 898 aaPredicted RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 PCGF5Q86SE9 256 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 CCT7Q99832 543 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 CALN1Q9BXU9 219 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 PSTPIP2Q9H939 334 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 DDX18Q9NVP1 670 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 GTSE1Q9NYZ3 720 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 ABCC12Q96J65 1359 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 TNNC2P02585 160 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 CNGA3Q16281 694 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 CCDC137Q6PK04 289 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 SUGP1Q8IWZ8 645 aaKnown RBP8.36□□□□□ -1.07
VANGL1-202ENST00000355485 STAG2Q8N3U4 1231 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 PPM1NQ8N819 430 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 SGSM3Q96HU1 749 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 GOLPH3Q9H4A6 298 aa8.36□□□□□ -1.07
VANGL1-202ENST00000355485 SMNDC1O75940 238 aaKnown RBP eCLIP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms