RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ESRRGP62508 458 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 SP8Q8IXZ3 490 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 CYP26B1Q9NR63 512 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 SEL1LQ9UBV2 794 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 TSPOAP1O95153 1857 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 ZNF564Q8TBZ8 553 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-202ENST00000355480 NCLNQ969V3 563 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 ABHD10Q9NUJ1 306 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 WDR19Q8NEZ3 1342 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 ASB14A6NK59 587 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 RCAN1P53805 252 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 ORC2Q13416 577 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-202ENST00000355480 GLE1Q53GS7 698 aaKnown RBP19.21■□□□□ 0.67
COL18A1-202ENST00000355480 KRT80Q6KB66 452 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 MB21D2Q8IYB1 491 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-202ENST00000355480 FARP1Q9Y4F1 1045 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-202ENST00000355480 MAGI3Q5TCQ9 1506 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 COPB2P35606 906 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 SP110Q9HB58 689 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 ZNF521Q96K83 1311 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 FDX1P10109 184 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 HMGCS2P54868 508 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 NUGGCQ68CJ6 796 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 ASIC4Q96FT7 647 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 VPS11Q9H270 941 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 INTUQ9ULD6 942 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 MAP3K4Q9Y6R4 1608 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 EFHC2Q5JST6 749 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 RBAKQ9NYW8 714 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-202ENST00000355480 HERC5Q9UII4 1024 aaKnown RBP19.21■□□□□ 0.67
COL18A1-202ENST00000355480 SUGT1Q9Y2Z0 365 aa19.21■□□□□ 0.67
COL18A1-202ENST00000355480 PPP1R12AO14974 1030 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-202ENST00000355480 IFNA8P32881 189 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 ARHGDIAP52565 204 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 KIF12Q96FN5 646 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 EIF2AK1Q9BQI3 630 aaKnown RBP19.2■□□□□ 0.66
COL18A1-202ENST00000355480 SPON2Q9BUD6 331 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 ABCB6Q9NP58 842 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 TTC7AQ9ULT0 858 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-202ENST00000355480 PLAAQ9Y263 795 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 IQCA1LA6NCM1 817 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 TDP2O95551 362 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 CDC27P30260 824 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 CASP8Q14790 479 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 WDR75Q8IWA0 830 aaKnown RBP19.2■□□□□ 0.66
COL18A1-202ENST00000355480 HADHAP40939 763 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 NAALADL2Q58DX5 795 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 GTSE1Q9NYZ3 720 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 SLC9A2Q9UBY0 812 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 A0A0G2JND7 137 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 AKR1B1P15121 316 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 SPARCL1Q14515 664 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 DRAP1Q14919 205 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-202ENST00000355480 HEATR6Q6AI08 1181 aaKnown RBP19.2■□□□□ 0.66
COL18A1-202ENST00000355480 ULK4Q96C45 1275 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 TRIM15Q9C019 465 aa19.2■□□□□ 0.66
COL18A1-202ENST00000355480 E5RI56 91 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 TNPO2O14787 897 aaKnown RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 MAPK13O15264 365 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 EN1Q05925 392 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 NFIXQ14938 502 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 DCAF4L1Q3SXM0 396 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 ZNF746Q6NUN9 644 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 EMBQ6PCB8 327 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 GPD1LQ8N335 351 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 KCNQ2O43526 872 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 RPSAP08865 295 aaKnown RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 AP1B1Q10567 949 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 IMPG1Q17R60 797 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 LDHDQ86WU2 507 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 TTC39CQ8N584 583 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 IP6K2Q9UHH9 426 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 KIF1BO60333 1816 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 SKIV2LQ15477 1246 aaKnown RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 CALR3Q96L12 384 aaKnown RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 ANLNQ9NQW6 1124 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 GSG1L2A8MUP6 293 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 KPNA7A9QM74 516 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 E2F5Q15329 346 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 TTC8Q8TAM2 541 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 FAM84BQ96KN1 310 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 SIK2Q9H0K1 926 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 PCDHA10Q9Y5I2 948 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 PP2D1A8MPX8 630 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 THOC1Q96FV9 657 aaKnown RBP19.19■□□□□ 0.66
COL18A1-202ENST00000355480 ELP3Q9H9T3 547 aa19.19■□□□□ 0.66
COL18A1-202ENST00000355480 ARHGAP31Q2M1Z3 1444 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 RASA4BC9J798 803 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 RASA4O43374 803 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 MTA3Q9BTC8 594 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 PITPNM3Q9BZ71 974 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 AGO2Q9UKV8 859 aaKnown RBP19.18■□□□□ 0.66
COL18A1-202ENST00000355480 SRGAP2O75044 1071 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 ANP32DO95626 131 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 SMARCA1P28370 1054 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 VEPH1Q14D04 833 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 ALX1Q15699 326 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 FAM102AQ5T9C2 384 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-202ENST00000355480 TTC23LQ6PF05 361 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 ISCA1Q9BUE6 129 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms