RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 NFIL3Q16649 462 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 USH1GQ495M9 461 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 NCAPH2Q6IBW4 605 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 FRMD5Q7Z6J6 570 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 TXLNBQ8N3L3 684 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 FAM207AQ9NSI2 230 aaPredicted RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 GNEQ9Y223 722 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 SAR1BQ9Y6B6 198 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 NPHP3-ACAD11A0A0J9YXS1 232 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 LRRC53A6NM62 1247 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 CETN3O15182 167 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 PSMD10O75832 226 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 ASGR1P07306 291 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 ALAS1P13196 640 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 EIF4A3P38919 411 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 KIF11P52732 1056 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 PSMC6P62333 389 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 ADAM9Q13443 819 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 HGSNATQ68CP4 663 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 B3GNT9Q6UX72 402 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 RRAGAQ7L523 313 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 ZNF572Q7Z3I7 529 aaPredicted RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 TRIM58Q8NG06 486 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 SLC5A5Q92911 643 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 SECISBP2LQ93073 1101 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 EIF2AK1Q9BQI3 630 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 FUT8Q9BYC5 575 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 OLFML3Q9NRN5 406 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 CYP39A1Q9NYL5 469 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 TBX21Q9UL17 535 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 MRPL11Q9Y3B7 192 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNU13-202ENST00000355257 LAMA2P24043 3122 aaKnown RBP12.1□□□□□ -0.47
SNU13-202ENST00000355257 SLC16A3O15427 465 aaKnown RBP12.1□□□□□ -0.47
SNU13-202ENST00000355257 SASH3O75995 380 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 ATP1A1P05023 1023 aaKnown RBP12.1□□□□□ -0.47
SNU13-202ENST00000355257 ICAM1P05362 532 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 C6orf222P0C671 652 aaPredicted RBP12.1□□□□□ -0.47
SNU13-202ENST00000355257 GAP43P17677 238 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 GHRHRQ02643 423 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 ITIH3Q06033 890 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 CKAP4Q07065 602 aaKnown RBP12.1□□□□□ -0.47
SNU13-202ENST00000355257 LONRF2Q1L5Z9 754 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 BEND6Q5SZJ8 279 aaPredicted RBP12.1□□□□□ -0.47
SNU13-202ENST00000355257 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 TAPT1Q6NXT6 567 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 SLC17A8Q8NDX2 589 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 REEP2Q9BRK0 252 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 IFIH1Q9BYX4 1025 aaKnown RBP12.1□□□□□ -0.47
SNU13-202ENST00000355257 GBP3Q9H0R5 595 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 PLCB1Q9NQ66 1216 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 AIPL1Q9NZN9 384 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 JRKLQ9Y4A0 524 aa12.1□□□□□ -0.47
SNU13-202ENST00000355257 KIAA1217Q5T5P2 1943 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 TARSL2A2RTX5 802 aaKnown RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 EML1O00423 815 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 EIF3DO15371 548 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNU13-202ENST00000355257 CALUO43852 315 aaPredicted RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 TACC1O75410 805 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 ERLIN1O75477 346 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 SLITRK3O94933 977 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 SEC31AO94979 1220 aaKnown RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 SERPING1P05155 500 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 KRT18P05783 430 aaKnown RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 HOXD13P35453 343 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 ZNF76P36508 570 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 CYP27A1Q02318 531 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 TERF2Q15554 542 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 DPY19L2P1Q6NXN4 242 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 RNF10Q8N5U6 811 aaKnown RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 SLC43A3Q8NBI5 491 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 PCSK9Q8NBP7 692 aaKnown RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 PNKPQ96T60 521 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 GANQ9H2C0 597 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 METTL14Q9HCE5 456 aaKnown RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 TMEM39AQ9NV64 488 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 TYW1Q9NV66 732 aaKnown RBP12.09□□□□□ -0.47
SNU13-202ENST00000355257 KCND2Q9NZV8 630 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 TBC1D7Q9P0N9 293 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 FBXL5Q9UKA1 691 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
SNU13-202ENST00000355257 SCN10AQ9Y5Y9 1956 aa12.08□□□□□ -0.47
SNU13-202ENST00000355257 ASB14A6NK59 587 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms