RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 TUBB4AP04350 444 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 PLA2G4BP0C869 781 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 JAK3P52333 1124 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 PSMC6P62333 389 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 LAMB3Q13751 1172 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 C1QTNF12Q5T7M4 302 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 KLHL10Q6JEL2 608 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 MIER3Q7Z3K6 550 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 VSTM4Q8IW00 320 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 COG1Q8WTW3 980 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 HSD3B7Q9H2F3 369 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 LOXHD1Q8IVV2 1947 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 PVALEFA0A1B0GWK0 134 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 SLC15A5A6NIM6 579 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 ASB14A6NK59 587 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 CHMP2AO43633 222 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 CLSTN1O94985 981 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 EYA4O95677 639 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 P4HBP07237 508 aaKnown RBP10.99□□□□□ -0.65
SYNE1-203ENST00000354674 EHHADHQ08426 723 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 MORN1Q5T089 497 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 HHATQ5VTY9 493 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 NAA35Q5VZE5 725 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 MAMDC4Q6UXC1 1216 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 PLEKHH3Q7Z736 793 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 KLHL23Q8NBE8 558 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 HDAC7Q8WUI4 952 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 DNAJC19Q96DA6 116 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 RUFY1Q96T51 708 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
SYNE1-203ENST00000354674 PIDD1Q9HB75 910 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 CPA4Q9UI42 421 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 ZNF232Q9UNY5 417 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 DNM3Q9UQ16 869 aa10.99□□□□□ -0.65
SYNE1-203ENST00000354674 ANKRD33BA6NCL7 494 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 DNM1LO00429 736 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 ATG7O95352 703 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 DNA2P51530 1060 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 TMEM62Q0P6H9 643 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 COBLL1Q53SF7 1204 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 ZNF658Q5TYW1 1059 aaPredicted RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 HIBCHQ6NVY1 386 aaPredicted RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 CCDC121Q6ZUS5 278 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 B4GALNT4Q76KP1 1039 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 MYLK4Q86YV6 388 aaPredicted RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 B4GALNT2Q8NHY0 566 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 ZFYVE28Q9HCC9 887 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 PKD2L1Q9P0L9 805 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 WDR64B1ANS9 1081 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 CYP11B2P19099 503 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 STX17P56962 302 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 CYP4A11Q02928 519 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 C2orf54Q08AI8 447 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 CTTNQ14247 550 aaKnown RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 PPP1R7Q15435 360 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 ARSHQ5FYA8 562 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 WLSQ5T9L3 541 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 RNPC3Q96LT9 517 aaKnown RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 BCAS3Q9H6U6 928 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 PPP1R3GB7ZBB8 358 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 DDX39AO00148 427 aaKnown RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 IKBKBO14920 756 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 TEX33O43247 280 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 CA12O43570 354 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 FSBPO95073 299 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 APLP1P51693 650 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 NOGQ13253 232 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 WDR78Q5VTH9 848 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 CYP4F22Q6NT55 531 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 UNC13DQ70J99 1090 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 BZW1Q7L1Q6 419 aaKnown RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 USP6NLQ92738 828 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 DDX12PQ92771 950 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 NACC1Q96RE7 527 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 LXNQ9BS40 222 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 PRDM16Q9HAZ2 1276 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 JPH1Q9HDC5 661 aaPredicted RBP10.98□□□□□ -0.65
SYNE1-203ENST00000354674 SLC9A2Q9UBY0 812 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 IVNS1ABPQ9Y6Y0 642 aa10.98□□□□□ -0.65
SYNE1-203ENST00000354674 WDR81Q562E7 1941 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 RBM47A0AV96 593 aaKnown RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 SMTNP53814 917 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 CRHR2Q13324 411 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 CCDC62Q6P9F0 684 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 ABHD15Q6UXT9 468 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 TPH2Q8IWU9 490 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 C4orf19Q8IY42 314 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 KATNBL1Q9H079 304 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 DACH1Q9UI36 760 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 GGT7Q9UJ14 662 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 PCDHA10Q9Y5I2 948 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 DOCK5Q9H7D0 1870 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 DIAPH2O60879 1101 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms