RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 C16orf71Q8IYS4 520 aaPredicted RBP4.96□□□□□ -1.62
SYF2-202ENST00000354361 ZCCHC14Q8WYQ9 949 aaKnown RBP4.96□□□□□ -1.62
SYF2-202ENST00000354361 SYAP1Q96A49 352 aaPredicted RBP4.96□□□□□ -1.62
SYF2-202ENST00000354361 ZNF496Q96IT1 587 aaPredicted RBP4.96□□□□□ -1.62
SYF2-202ENST00000354361 CHAMP1Q96JM3 812 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 WWC2-AS2Q96NR7 200 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 NKX2-4Q9H2Z4 354 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 DTLQ9NZJ0 730 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 HMG20BQ9P0W2 317 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 CROTQ9UKG9 612 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 TCAF1Q9Y4C2 921 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 HS3ST3A1Q9Y663 406 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 X6R8D5 127 aa4.96□□□□□ -1.62
SYF2-202ENST00000354361 COL5A2P05997 1499 aaPredicted RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 MRC1P22897 1456 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 ADCY9O60503 1353 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 RFX7Q2KHR2 1363 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 PATE3B3GLJ2 98 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 ERVV-1B6SEH8 477 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 MUSKO15146 869 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 TBX1O43435 398 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 MYO1BO43795 1136 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 CIAO1O76071 339 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 ZFYP08048 801 aaPredicted RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 SNRPB2P08579 225 aaKnown RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 PDCP20941 246 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 BCL6P41182 706 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 KCNJ6P48051 423 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 NEK4P51957 841 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 ZNF143P52747 638 aaPredicted RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 SLC39A6Q13433 755 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 LARP1BQ659C4 914 aaKnown RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 SLFN13Q68D06 897 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 CCDC103Q8IW40 242 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 ARRDC4Q8NCT1 418 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 DIO2Q92813 273 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 TOE1Q96GM8 510 aaKnown RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 TMEM169Q96HH4 297 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 MRGPRX3Q96LB0 322 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 TM6SF1Q9BZW5 370 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 MEGF9Q9H1U4 602 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 BICC1Q9H694 974 aaKnown RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 CCSER2Q9H7U1 834 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 IL1RAPL2Q9NP60 686 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 FTSJ1Q9UET6 329 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 CTNNA3Q9UI47 895 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 TMEFF2Q9UIK5 374 aaPredicted RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 FBXL7Q9UJT9 491 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 STRIP2Q9ULQ0 834 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 COA3Q9Y2R0 106 aaPredicted RBP4.95□□□□□ -1.62
SYF2-202ENST00000354361 USP16Q9Y5T5 823 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 MRVI1Q9Y6F6 885 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 ADAMTS7Q9UKP4 1686 aa4.95□□□□□ -1.62
SYF2-202ENST00000354361 N4BP2Q86UW6 1770 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 GOLGA6L3A6NEY3 463 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 MEFVO15553 781 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 KCNQ3O43525 872 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 B4GALT4O60513 344 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 CYP7B1O75881 506 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 LETM1O95202 739 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 ATP5JP18859 108 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 HSPA4P34932 840 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 IFIT5Q13325 482 aaKnown RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 TCIRG1Q13488 830 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 TTF1Q15361 905 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 DDB1Q16531 1140 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 PRSS53Q2L4Q9 553 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 RABL6Q3YEC7 729 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 PARP10Q53GL7 1025 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 E4F1Q66K89 784 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 TEPPQ6URK8 271 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 C6orf15Q6UXA7 325 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 KLHL36Q8N4N3 616 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 ZBTB38Q8NAP3 1195 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.94□□□□□ -1.62
SYF2-202ENST00000354361 DDX17Q92841 729 aaKnown RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 SUCLG2Q96I99 432 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 WRNIP1Q96S55 665 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 FSD1Q9BTV5 496 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.94□□□□□ -1.62
SYF2-202ENST00000354361 ING1Q9UK53 422 aaPredicted RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 CCDC9Q9Y3X0 531 aaKnown RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 PCDHB4Q9Y5E5 795 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 CYP46A1Q9Y6A2 500 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 PKD1L3Q7Z443 1732 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 SALL3Q9BXA9 1300 aa4.94□□□□□ -1.62
SYF2-202ENST00000354361 WDR33Q9C0J8 1336 aaKnown RBP4.94□□□□□ -1.62
SYF2-202ENST00000354361 SCN11AQ9UI33 1791 aa4.93□□□□□ -1.62
SYF2-202ENST00000354361 MEGF6O75095 1541 aa4.93□□□□□ -1.62
SYF2-202ENST00000354361 TCRBV5S2A0A599 114 aa4.93□□□□□ -1.62
SYF2-202ENST00000354361 ANKRD18BA2A2Z9 1011 aa4.93□□□□□ -1.62
SYF2-202ENST00000354361 B2RBV5 119 aa4.93□□□□□ -1.62
SYF2-202ENST00000354361 HGSO14964 777 aaPredicted RBP4.93□□□□□ -1.62
SYF2-202ENST00000354361 SMAD7O15105 426 aaKnown RBP4.93□□□□□ -1.62
SYF2-202ENST00000354361 KDM6AO15550 1401 aaPredicted RBP4.93□□□□□ -1.62
SYF2-202ENST00000354361 IGSF3O75054 1194 aa4.93□□□□□ -1.62
SYF2-202ENST00000354361 MBD3O95983 291 aa4.93□□□□□ -1.62
SYF2-202ENST00000354361 PCCAP05165 728 aaPredicted RBP4.93□□□□□ -1.62
SYF2-202ENST00000354361 ITGAVP06756 1048 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms