RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ARHGAP44Q17R89 818 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TBC1D25Q3MII6 688 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 SEL1L2Q5TEA6 688 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 KCNK18Q7Z418 384 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TRIM59Q8IWR1 403 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 SYCP3Q8IZU3 236 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 ZNF444Q8N0Y2 327 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 RASGEF1CQ8N431 466 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 FAM81AQ8TBF8 368 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 MAIP1Q8WWC4 291 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 STMN2Q93045 179 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 ANKRD27Q96NW4 1050 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 PNMA5Q96PV4 448 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 EMILIN3Q9NT22 766 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 CHCHD3Q9NX63 227 aaKnown RBP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TMOD3Q9NYL9 352 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 CHORDC1Q9UHD1 332 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 CICQ96RK0 1608 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 AFPP02771 609 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 ZCCHC18P0CG32 403 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 CACNA2D1P54289 1103 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 IL9RQ01113 521 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 PLS1Q14651 629 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 MTHFD1LQ6UB35 978 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 ZDHHC24Q6UX98 284 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 REXO1Q8N1G1 1221 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 DYNLL2Q96FJ2 89 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 DDX50Q9BQ39 737 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 TBC1D10AQ9BXI6 508 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 FGFBP2Q9BYJ0 223 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 KIAA1683Q9H0B3 1180 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 BARHL2Q9NY43 387 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 GCNT4Q9P109 453 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 TDP2O95551 362 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 STRN3Q13033 797 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 DYNC1I2Q13409 638 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 MESDQ14696 234 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 KYNUQ16719 465 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 ZC3H12AQ5D1E8 599 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 HHATQ5VTY9 493 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 ASRGL1Q7L266 308 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 GPBP1Q86WP2 473 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 UBL4BQ8N7F7 174 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 RBBP8NLQ8NC74 664 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 CKAP2Q8WWK9 683 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 HES6Q96HZ4 224 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 RBM41Q96IZ5 413 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 CEP63Q96MT8 703 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 ADAM33Q9BZ11 813 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 GANQ9H2C0 597 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 CDC42EP4Q9H3Q1 356 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 CCDC134Q9H6E4 229 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 CNOT7Q9UIV1 285 aaKnown RBP8.2□□□□□ -1.1
BRCA1-201ENST00000352993 MTUS1Q9ULD2 1270 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 ASAP1Q9ULH1 1129 aa8.2□□□□□ -1.1
BRCA1-201ENST00000352993 E9PMD0 336 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 DDX3XO00571 662 aaKnown RBP eCLIP8.19□□□□□ -1.11e-8■■■□□ 17.6
BRCA1-201ENST00000352993 PODXLO00592 558 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 ATP5HO75947 161 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 GJB6O95452 261 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 RCN1Q15293 331 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 TMED2Q15363 201 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SPDYCQ5MJ68 293 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 GALNT17Q6IS24 598 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 BTNL9Q6UXG8 535 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 CCNJLQ8IV13 435 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SCYL3Q8IZE3 742 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 VPS52Q8N1B4 723 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 UTP4Q969X6 686 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 MCUR1Q96AQ8 359 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 KIAA1024Q9UPX6 916 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PFASO15067 1338 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PASKQ96RG2 1323 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PITPNM2Q9BZ72 1349 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 MYH3P11055 1940 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PHF2O75151 1096 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PYGBP11216 843 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 RARGP13631 454 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 GNAZP19086 355 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 RXRBP28702 533 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 LBRQ14739 615 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SEPT7Q16181 437 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 CAVIN4Q5BKX8 364 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SNX30Q5VWJ9 437 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 ARHGAP27Q6ZUM4 889 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SH3RF3Q8TEJ3 882 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 DYDC2Q96IM9 177 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 RIOK1Q9BRS2 568 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 BRIP1Q9BX63 1249 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 TXLNGYQ9BZA5 131 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 USP40Q9NVE5 1235 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 NMRK1Q9NWW6 199 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PCDH11XQ9BZA7 1347 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 CLIC2O15247 247 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SPOPO43791 374 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 WFS1O76024 890 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms