RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 FGD4Q96M96 766 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 ALS2CR12Q96Q35 445 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 ELP3Q9H9T3 547 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 HSPBP1Q9NZL4 362 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 GCNT4Q9P109 453 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 APEX2Q9UBZ4 518 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 STRNO43815 780 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 AKR1B10O60218 316 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 VAMP7P51809 220 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 CCNA1P78396 465 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 CCDC60Q8IWA6 550 aaPredicted RBP11.72□□□□□ -0.53
EPB41-203ENST00000349460 HNRNPLLQ8WVV9 542 aaKnown RBP11.72□□□□□ -0.53
EPB41-203ENST00000349460 SEPT1Q8WYJ6 367 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 DEF6Q9H4E7 631 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
EPB41-203ENST00000349460 IGKV6-21A0A0C4DH24 114 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 EXOC3O60645 756 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 ZBTB48P10074 688 aaPredicted RBP11.71□□□□□ -0.53
EPB41-203ENST00000349460 CETPP11597 493 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
EPB41-203ENST00000349460 MAGEA1P43355 309 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 GADL1Q6ZQY3 521 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
EPB41-203ENST00000349460 UBXN4Q92575 508 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 NFKBIZQ9BYH8 718 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 KMT5AQ9NQR1 393 aa11.71□□□□□ -0.53
EPB41-203ENST00000349460 GSTTP1A0A1W2PQM5 241 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 SFI1A8K8P3 1242 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 MAFO75444 373 aaPredicted RBP11.71□□□□□ -0.54
EPB41-203ENST00000349460 LDHAP00338 332 aaKnown RBP11.71□□□□□ -0.54
EPB41-203ENST00000349460 TCP1P17987 556 aaKnown RBP11.71□□□□□ -0.54
EPB41-203ENST00000349460 SOX5P35711 763 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 GPC3P51654 580 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 GTF2A2P52657 109 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 MYL7Q01449 175 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 KLHL30Q0D2K2 578 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 SWSAP1Q6NVH7 229 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 CCDC62Q6P9F0 684 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 TCP11Q8WWU5 503 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 FAXDC2Q96IV6 333 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 UIMC1Q96RL1 719 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 ARGLU1Q9NWB6 273 aaPredicted RBP11.71□□□□□ -0.54
EPB41-203ENST00000349460 FAM53CQ9NYF3 392 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.54
EPB41-203ENST00000349460 RAB21Q9UL25 225 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 COL1A2P08123 1366 aa11.71□□□□□ -0.54
EPB41-203ENST00000349460 TARSL2A2RTX5 802 aaKnown RBP11.7□□□□□ -0.54
EPB41-203ENST00000349460 CLSTN1O94985 981 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 ERCC3P19447 782 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 MCM3P25205 808 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 EFNA5P52803 228 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 AP3M2P53677 418 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 SP2Q02086 613 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 CDCA2Q69YH5 1023 aaPredicted RBP11.7□□□□□ -0.54
EPB41-203ENST00000349460 ZPBP2Q6X784 338 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 NOX5Q96PH1 765 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 INTS2Q9H0H0 1204 aaKnown RBP11.7□□□□□ -0.54
EPB41-203ENST00000349460 TMEM8AQ9HCN3 771 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 SAR1BQ9Y6B6 198 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 F8VZ95 297 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 CLIC2O15247 247 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 SLC9A1P19634 815 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 ATP4AP20648 1035 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 EMC2Q15006 297 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 BRD3Q15059 726 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 CELF3Q5SZQ8 465 aaKnown RBP11.7□□□□□ -0.54
EPB41-203ENST00000349460 C1orf220Q5T0J3 134 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
EPB41-203ENST00000349460 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 NCANO14594 1321 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 HOXD8P13378 290 aaPredicted RBP11.7□□□□□ -0.54
EPB41-203ENST00000349460 PEX3P56589 373 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 PLS1Q14651 629 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 KCTD2Q14681 263 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 FAM102BQ5T8I3 360 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 IER5Q5VY09 327 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 C15orf39Q6ZRI6 1047 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 EEF2KMTQ96G04 330 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 SPAG5Q96R06 1193 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 MMP19Q99542 508 aa11.7□□□□□ -0.54
EPB41-203ENST00000349460 RCCD1A6NED2 376 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 EXTL3O43909 919 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 CNGA1P29973 690 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 PPP1R2P3Q6NXS1 205 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
EPB41-203ENST00000349460 CARD6Q9BX69 1037 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 GPR88Q9GZN0 384 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 FHOD1Q9Y613 1164 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 TRPM7Q96QT4 1865 aa11.69□□□□□ -0.54
EPB41-203ENST00000349460 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms