RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 ACBD5Q5T8D3 534 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 C11orf57Q6ZUT1 292 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 TMC6Q7Z403 805 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 DHX40Q8IX18 779 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 LRRC47Q8N1G4 583 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 STAG1Q8WVM7 1258 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 CCDC34Q96HJ3 373 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 PCDH11XQ9BZA7 1347 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 PCDH11YQ9BZA8 1340 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 ZCCHC17Q9NP64 241 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 VPS18Q9P253 973 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 JCADQ9P266 1359 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 NPFFR2Q9Y5X5 522 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 DLX3O60479 287 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 PPP1R11O60927 126 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 LARGE1O95461 756 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 IL2RBP14784 551 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 ZKSCAN1P17029 563 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 PAMP19021 973 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 L1CAMP32004 1257 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 TTLL5Q6EMB2 1281 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 TOM1L2Q6ZVM7 507 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 AOPEPQ8N6M6 819 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 NAT16Q8N8M0 369 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 OSBP2Q969R2 916 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 JAKMIP1Q96N16 626 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 AARSD1Q9BTE6 412 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 A1CFQ9NQ94 594 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 RAI14Q9P0K7 980 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 SUFUQ9UMX1 484 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 DOT1LQ8TEK3 1739 aa8.66□□□□□ -1.02
UBE2D3-204ENST00000349311 ERVV-2B6SEH9 535 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 H3BQF6 201 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 CYP27B1O15528 508 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 MSL3P1P0C860 447 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 PLS3P13797 630 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 ERVFRD-1P60508 538 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 EIF4A1P60842 406 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 SLC14A2Q15849 920 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 MTERF2Q49AM1 385 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 CCDC30Q5VVM6 783 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 MBLAC2Q68D91 279 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 ARMCX5Q6P1M9 558 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 TRIM65Q6PJ69 517 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 KSR1Q8IVT5 923 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 CCDC103Q8IW40 242 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 CCAR1Q8IX12 1150 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 CEP112Q8N8E3 955 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 TMEM145Q8NBT3 493 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 CTCFLQ8NI51 663 aaPredicted RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 PGBD1Q96JS3 809 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 ZNF396Q96N95 335 aaPredicted RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 PARD6BQ9BYG5 372 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 SLC52A2Q9HAB3 445 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 CLEC1BQ9P126 229 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 TMEFF2Q9UIK5 374 aaPredicted RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 GPR160Q9UJ42 338 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 MRFAP1Q9Y605 127 aa8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 AFDNP55196 1824 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-204ENST00000349311 ARFGEF2Q9Y6D5 1785 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 SPATA31A6Q5VVP1 1343 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 C7orf72A4D263 438 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 HIP1O00291 1037 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 ERLIN2O94905 339 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 SNRPB2P08579 225 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 EVA1CP58658 441 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 RESTQ13127 1097 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 SART3Q15020 963 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 ME3Q16798 604 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 KRT24Q2M2I5 525 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 LRRC31Q6UY01 552 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 IRF2BP1Q8IU81 584 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 ZBTB38Q8NAP3 1195 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 MSANTD4Q8NCY6 345 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 LIN37Q96GY3 246 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 SRPK1Q96SB4 655 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 BTG4Q9NY30 223 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 TAF6LQ9Y6J9 622 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 LAMA4Q16363 1823 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
UBE2D3-204ENST00000349311 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 THSD7AQ9UPZ6 1657 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 ATXN2Q99700 1313 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 USP42Q9H9J4 1324 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 NPHP3-ACAD11A0A0J9YXS1 232 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 TMCO5BA8MYB1 307 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 ARHGAP6O43182 974 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 HSP90B1P14625 803 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 GALK1P51570 392 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 MNAT1P51948 309 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 ST3GAL1Q11201 340 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 LAPTM5Q13571 262 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 INF2Q27J81 1249 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 PRSS53Q2L4Q9 553 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 IQCEQ6IPM2 695 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms