RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ACVR2BQ13705 512 aa15.36■□□□□ 0.05
RLIM-202ENST00000349225 DHX34Q14147 1143 aaKnown RBP15.36■□□□□ 0.05
RLIM-202ENST00000349225 SLC30A5Q8TAD4 765 aa15.36■□□□□ 0.05
RLIM-202ENST00000349225 CEP63Q96MT8 703 aa15.36■□□□□ 0.05
RLIM-202ENST00000349225 TRIM7Q9C029 511 aa15.36■□□□□ 0.05
RLIM-202ENST00000349225 CDC42EP4Q9H3Q1 356 aaKnown RBP15.36■□□□□ 0.05
RLIM-202ENST00000349225 KCNK9Q9NPC2 374 aa15.36■□□□□ 0.05
RLIM-202ENST00000349225 DCP1AQ9NPI6 582 aaPredicted RBP15.36■□□□□ 0.05
RLIM-202ENST00000349225 ATP8A2Q9NTI2 1148 aa15.36■□□□□ 0.05
RLIM-202ENST00000349225 ARMCX3Q9UH62 379 aaPredicted RBP15.36■□□□□ 0.05
RLIM-202ENST00000349225 NUP98P52948 1817 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 CBX6O95503 412 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 IGHMBP2P38935 993 aaKnown RBP15.35■□□□□ 0.05
RLIM-202ENST00000349225 NPEPPSP55786 919 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 GRM4Q14833 912 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 NONOQ15233 471 aaKnown RBP eCLIP15.35■□□□□ 0.05
RLIM-202ENST00000349225 KHDC1Q4VXA5 237 aaKnown RBP15.35■□□□□ 0.05
RLIM-202ENST00000349225 TMEM63BQ5T3F8 832 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 KRT35Q92764 455 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 KLHL14Q9P2G3 628 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 ERVV-2B6SEH9 535 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 PLSCR1O15162 318 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 CYP1A1P04798 512 aaPredicted RBP15.35■□□□□ 0.05
RLIM-202ENST00000349225 ABCB4P21439 1286 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 CUL3Q13618 768 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 RRP1BQ14684 758 aaKnown RBP15.35■□□□□ 0.05
RLIM-202ENST00000349225 FAM26FQ5R3K3 315 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 PALB2Q86YC2 1186 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 ZC3H3Q8IXZ2 948 aaKnown RBP15.35■□□□□ 0.05
RLIM-202ENST00000349225 SYCE1Q8N0S2 351 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 CARD9Q9H257 536 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 TAS2R14Q9NYV8 317 aa15.35■□□□□ 0.05
RLIM-202ENST00000349225 TDP2O95551 362 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 CASP5P51878 434 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 SESN3P58005 492 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 TMEM119Q4V9L6 283 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 MIGA2Q7L4E1 593 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 CCDC25Q86WR0 208 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 RBBP8NLQ8NC74 664 aaPredicted RBP15.34■□□□□ 0.05
RLIM-202ENST00000349225 ART4Q93070 314 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 BIN2Q9UBW5 565 aaPredicted RBP15.34■□□□□ 0.05
RLIM-202ENST00000349225 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 USP20Q9Y2K6 914 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 USP17L3A6NCW0 530 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 USP17L4A6NCW7 530 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 PCP11498 1178 aaKnown RBP15.34■□□□□ 0.05
RLIM-202ENST00000349225 ALAS1P13196 640 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 USP17L1Q7RTZ2 530 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 APBB1IPQ7Z5R6 666 aaPredicted RBP15.34■□□□□ 0.05
RLIM-202ENST00000349225 GLYCTKQ8IVS8 523 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 KLHL23Q8NBE8 558 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 EXOC3L4Q17RC7 722 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 CERKLQ49MI3 558 aaPredicted RBP15.34■□□□□ 0.05
RLIM-202ENST00000349225 AZIN2Q96A70 460 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 MIPEPQ99797 713 aa15.34■□□□□ 0.05
RLIM-202ENST00000349225 PHF2O75151 1096 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 SPATA31D3P0C874 917 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 CHRNB2P17787 502 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 CHKAP35790 457 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 IRGCQ6NXR0 463 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 ZNF449Q6P9G9 518 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 SPATA31D4Q6ZUB0 917 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 MARCH10Q8NA82 808 aaPredicted RBP15.33■□□□□ 0.05
RLIM-202ENST00000349225 SNX29Q8TEQ0 813 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 ZNF526Q8TF50 670 aaPredicted RBP15.33■□□□□ 0.05
RLIM-202ENST00000349225 METTL5Q9NRN9 209 aaKnown RBP15.33■□□□□ 0.05
RLIM-202ENST00000349225 TXLNGQ9NUQ3 528 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 ARPP21Q9UBL0 812 aaPredicted RBP15.33■□□□□ 0.05
RLIM-202ENST00000349225 ASAP1Q9ULH1 1129 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 PTPN22Q9Y2R2 807 aa15.33■□□□□ 0.05
RLIM-202ENST00000349225 BZW2Q9Y6E2 419 aaKnown RBP15.33■□□□□ 0.05
RLIM-202ENST00000349225 SMCO2A6NFE2 343 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 GFPT2O94808 682 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 BRAFP15056 766 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 KCNJ1P48048 391 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 GIT2Q14161 759 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 AGGF1Q8N302 714 aaeCLIP15.33■□□□□ 0.04
RLIM-202ENST00000349225 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
RLIM-202ENST00000349225 FGD4Q96M96 766 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 SLCO1B3Q9NPD5 702 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 PCYOX1Q9UHG3 505 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 NCANO14594 1321 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.04
RLIM-202ENST00000349225 POLGP54098 1239 aaPredicted RBP15.33■□□□□ 0.04
RLIM-202ENST00000349225 WDR4P57081 412 aaKnown RBP15.33■□□□□ 0.04
RLIM-202ENST00000349225 TFAP4Q01664 338 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.04
RLIM-202ENST00000349225 RCN2Q14257 317 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 EPHA7Q15375 998 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 PABPC1LQ4VXU2 614 aaKnown RBP15.33■□□□□ 0.04
RLIM-202ENST00000349225 GALNT17Q6IS24 598 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 CPNE8Q86YQ8 564 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 BICD1Q96G01 975 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 MAGEB18Q96M61 343 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 TOGARAM1Q9Y4F4 1720 aa15.33■□□□□ 0.04
RLIM-202ENST00000349225 NVLO15381 856 aaKnown RBP15.32■□□□□ 0.04
RLIM-202ENST00000349225 HOXD13P35453 343 aa15.32■□□□□ 0.04
RLIM-202ENST00000349225 EPS15P42566 896 aa15.32■□□□□ 0.04
RLIM-202ENST00000349225 SCNN1BP51168 640 aa15.32■□□□□ 0.04
RLIM-202ENST00000349225 NAPAP54920 295 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms