RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SPIRE2Q8WWL2 714 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 CLMNQ96JQ2 1002 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 TBX20Q9UMR3 447 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 CCDC169A6NNP5 214 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 EVI5O60447 810 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 MCCD1P59942 119 aaPredicted RBP22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 VSNL1P62760 191 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 DLG4P78352 724 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 CNTN2Q02246 1040 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 DRAP1Q14919 205 aaPredicted RBP22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 STXBP2Q15833 593 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 NFRKBQ6P4R8 1299 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 MOB2Q70IA6 237 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 MAP4K3Q8IVH8 894 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 FUT8Q9BYC5 575 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 BTBD7Q9P203 1132 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 TELO2Q9Y4R8 837 aa22.15■■□□□ 1.14
CHRNA3-202ENST00000348639 EMSYQ7Z589 1322 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 PALMO75781 387 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 EIF3JO75822 258 aaKnown RBP22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 ICAM3P32942 547 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 CETN1Q12798 172 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 BEND6Q5SZJ8 279 aaPredicted RBP22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 MIS18BP1Q6P0N0 1132 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 CCDC60Q8IWA6 550 aaPredicted RBP22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 GPR88Q9GZN0 384 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 PDLIM7Q9NR12 457 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 FBXO40Q9UH90 709 aa22.14■■□□□ 1.14
CHRNA3-202ENST00000348639 PTPRFP10586 1907 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 WDR81Q562E7 1941 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 PFASO15067 1338 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 TARSL2A2RTX5 802 aaKnown RBP22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 NCK2O43639 380 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 DGAT1O75907 488 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 SASH3O75995 380 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 DPY19L2Q6NUT2 758 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 MCPH1Q8NEM0 835 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 KMT5AQ9NQR1 393 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 OTOFQ9HC10 1997 aa22.14■■□□□ 1.13
CHRNA3-202ENST00000348639 LCTP09848 1927 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 CCDC172P0C7W6 258 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 PLA2G4AP47712 749 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 RTP1P59025 263 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 IRX3P78415 501 aaPredicted RBP22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 PRKCEQ02156 737 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 PPP3CAQ08209 521 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 RIOX2Q8IUF8 465 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 BSNDQ8WZ55 320 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 INTUQ9ULD6 942 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 DOCK5Q9H7D0 1870 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 DENND3A2RUS2 1198 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 DDX3XO00571 662 aaKnown RBP eCLIP22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 PMM2O15305 246 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 SUPT20HL2P0C7V6 817 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 MCM3P25205 808 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 NF2P35240 595 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 FSTL1Q12841 308 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 C1orf220Q5T0J3 134 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 PHLDB3Q6NSJ2 640 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 ZSWIM2Q8NEG5 633 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 PAGR1Q9BTK6 254 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 CYP26B1Q9NR63 512 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 PAPPA2Q9BXP8 1791 aa22.13■■□□□ 1.13
CHRNA3-202ENST00000348639 CNGA1P29973 690 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 ADSSP30520 456 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 SP2Q02086 613 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 PPATQ06203 517 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 NCAPG2Q86XI2 1143 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 ANKRD13AQ8IZ07 590 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 SLC30A5Q8TAD4 765 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 CDCA5Q96FF9 252 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 KIFC3Q9BVG8 833 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 ABCB6Q9NP58 842 aa22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 SEPT9Q9UHD8 586 aaPredicted RBP22.12■■□□□ 1.13
CHRNA3-202ENST00000348639 IGSF9BQ9UPX0 1349 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 GRID2IPA4D2P6 1211 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 ANKRD63C9JTQ0 380 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 CXCR5P32302 372 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 IFI16Q16666 785 aaKnown RBP22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 EPC2Q52LR7 807 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 XKR3Q5GH77 459 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 MEI1Q5TIA1 1274 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 ERO1BQ86YB8 467 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 MMGT1Q8N4V1 131 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 PLEKHO2Q8TD55 490 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 VTI1AQ96AJ9 217 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 XPNPEP1Q9NQW7 623 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 RNF14Q9UBS8 474 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 A0A0G2JLL6 359 aaPredicted RBP22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 MAP2K7O14733 419 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 ATG7O95352 703 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 GCLMP48507 274 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 ALDH5A1P51649 535 aaPredicted RBP22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 SOX10P56693 466 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 C2orf54Q08AI8 447 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 SEPT14Q6ZU15 432 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 PRRT2Q7Z6L0 340 aaPredicted RBP22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 PROCA1Q8NCQ7 364 aaPredicted RBP22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 OLIG1Q8TAK6 271 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 PSMB7Q99436 277 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms