RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ZNF233A6NK53 670 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 BACH1O14867 736 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 IRX3P78415 501 aaPredicted RBP23.15■■□□□ 1.3
PTPN18-202ENST00000347849 TCERG1LQ5VWI1 586 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 RNF10Q8N5U6 811 aaKnown RBP23.15■■□□□ 1.3
PTPN18-202ENST00000347849 SAMD3Q8N6K7 520 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 SLC35C1Q96A29 364 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 BORCS6Q96GS4 357 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 GANQ9H2C0 597 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 GDF3Q9NR23 364 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 CEP72Q9P209 647 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 OAZ1P54368 228 aa23.14■■□□□ 1.29
PTPN18-202ENST00000347849 RNPC3Q96LT9 517 aaKnown RBP23.14■■□□□ 1.29
PTPN18-202ENST00000347849 STRA6Q9BX79 667 aa23.14■■□□□ 1.29
PTPN18-202ENST00000347849 KCND2Q9NZV8 630 aa23.14■■□□□ 1.29
PTPN18-202ENST00000347849 A6NNZ2 444 aa23.14■■□□□ 1.29
PTPN18-202ENST00000347849 PALMO75781 387 aa23.14■■□□□ 1.29
PTPN18-202ENST00000347849 XRCC5P13010 732 aaKnown RBP23.14■■□□□ 1.29
PTPN18-202ENST00000347849 SP4Q02446 784 aa23.14■■□□□ 1.29
PTPN18-202ENST00000347849 TUBB8Q3ZCM7 444 aa23.14■■□□□ 1.29
PTPN18-202ENST00000347849 DICER1Q9UPY3 1922 aaKnown RBP23.13■■□□□ 1.29
PTPN18-202ENST00000347849 PPP1R37O75864 691 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 FTCDO95954 541 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 AFPP02771 609 aaKnown RBP23.13■■□□□ 1.29
PTPN18-202ENST00000347849 CCND2P30279 289 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 HNRNPH1P31943 449 aaKnown RBP23.13■■□□□ 1.29
PTPN18-202ENST00000347849 GUCY1A3Q02108 690 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 B4GALNT4Q76KP1 1039 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 INPP4AQ96PE3 977 aaPredicted RBP23.13■■□□□ 1.29
PTPN18-202ENST00000347849 R3HDMLQ9H3Y0 253 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 AGPAT3Q9NRZ7 376 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
PTPN18-202ENST00000347849 SEL1LQ9UBV2 794 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 CYP2J2P51589 502 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 ARID5AQ03989 594 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 TRADDQ15628 312 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 KRT12Q99456 494 aa23.13■■□□□ 1.29
PTPN18-202ENST00000347849 AJAP1Q9UKB5 411 aaPredicted RBP23.13■■□□□ 1.29
PTPN18-202ENST00000347849 PACSIN2Q9UNF0 486 aaPredicted RBP23.13■■□□□ 1.29
PTPN18-202ENST00000347849 SSU72P8A0A1W2PR75 194 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 ATP2A1O14983 1001 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 RPL13P26373 211 aaKnown RBP23.12■■□□□ 1.29
PTPN18-202ENST00000347849 ENOX2Q16206 610 aaKnown RBP23.12■■□□□ 1.29
PTPN18-202ENST00000347849 SH3D19Q5HYK7 790 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 NSUN6Q8TEA1 469 aaKnown RBP23.12■■□□□ 1.29
PTPN18-202ENST00000347849 CLMNQ96JQ2 1002 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 ACAD9Q9H845 621 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 HOXC10Q9NYD6 342 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 TSKSQ9UJT2 592 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 DBR1Q9UK59 544 aaKnown RBP23.12■■□□□ 1.29
PTPN18-202ENST00000347849 PNMA2Q9UL42 364 aa23.12■■□□□ 1.29
PTPN18-202ENST00000347849 KCNA2P16389 499 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 PON1P27169 355 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 CNTN2Q02246 1040 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 PAK2Q13177 524 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 SLC9C1Q4G0N8 1177 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 RNF14Q9UBS8 474 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 WDR64B1ANS9 1081 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 K7ENM7 598 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 LYPLA2O95372 231 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 ANO5Q75V66 913 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 PIK3R5Q8WYR1 880 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 EDEM3Q9BZQ6 932 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 BTBD7Q9P203 1132 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 CAPN7Q9Y6W3 813 aa23.11■■□□□ 1.29
PTPN18-202ENST00000347849 ZNF862O60290 1169 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 LSP1P33241 339 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 SOX10P56693 466 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 PSMC5P62195 406 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 GJB7Q6PEY0 223 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 SULF1Q8IWU6 871 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 C4orf19Q8IY42 314 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 FAM186BQ8IYM0 893 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 OTUD6BQ8N6M0 293 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 RDH13Q8NBN7 331 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 DCPSQ96C86 337 aaKnown RBP23.1■■□□□ 1.29
PTPN18-202ENST00000347849 SYT17Q9BSW7 474 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 IRF6O14896 467 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 SLC16A3O15427 465 aaKnown RBP23.1■■□□□ 1.29
PTPN18-202ENST00000347849 KLRC1P26715 233 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 RAPGEF1Q13905 1077 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 SFMBT2Q5VUG0 894 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 KDM7AQ6ZMT4 941 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 NLRX1Q86UT6 975 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 FAM133AQ8N9E0 248 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 ZSWIM2Q8NEG5 633 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 CASKIN2Q8WXE0 1202 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 YY1AP1Q9H869 796 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 ELP3Q9H9T3 547 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 DMAC2Q9NW81 257 aa23.1■■□□□ 1.29
PTPN18-202ENST00000347849 KIAA0754O94854 1291 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 MNAT1P51948 309 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 KRT76Q01546 638 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 SP2Q02086 613 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 XKR9Q5GH70 373 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 GPRASP2Q96D09 838 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.09■■□□□ 1.29
PTPN18-202ENST00000347849 MOV10L1Q9BXT6 1211 aaKnown RBP23.09■■□□□ 1.29
PTPN18-202ENST00000347849 EXOC3L4Q17RC7 722 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 C9orf131Q5VYM1 1079 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms