RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SLC35G2Q8TBE7 412 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 CAVIN3Q969G5 261 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 DMGDHQ9UI17 866 aaKnown RBP15.81■□□□□ 0.12
NUP50-201ENST00000347635 MED1Q15648 1581 aaPredicted RBP15.81■□□□□ 0.12
NUP50-201ENST00000347635 KRT19P08727 400 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 MORC4Q8TE76 937 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 HAUS2Q9NVX0 235 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 HACL1Q9UJ83 578 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 ABT1Q9ULW3 272 aaKnown RBP15.81■□□□□ 0.12
NUP50-201ENST00000347635 PFASO15067 1338 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 CAMTA1Q9Y6Y1 1673 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 GOLGA8IPA6NC78 632 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 GOLGA8JA6NMD2 632 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 HNRNPH1P31943 449 aaKnown RBP15.81■□□□□ 0.12
NUP50-201ENST00000347635 PEX19P40855 299 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 TAF11Q15544 211 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 SEC16BQ96JE7 1060 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 WNT8AQ9H1J5 351 aa15.81■□□□□ 0.12
NUP50-201ENST00000347635 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.81■□□□□ 0.12
NUP50-201ENST00000347635 ESYT2A0FGR8 921 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 KRT1P04264 644 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 GALCP54803 685 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 KIAA1755Q5JYT7 1200 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 ZNF564Q8TBZ8 553 aaPredicted RBP15.8■□□□□ 0.12
NUP50-201ENST00000347635 PITPNM3Q9BZ71 974 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 SEL1LQ9UBV2 794 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 CFAP73A6NFT4 308 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 GCLMP48507 274 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 VGLL2Q8N8G2 317 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 NUP85Q9BW27 656 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 SLC9A1P19634 815 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 HSD17B3P37058 310 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 CAV1Q03135 178 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 PPP1R2P3Q6NXS1 205 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 TAB3Q8N5C8 712 aaPredicted RBP15.8■□□□□ 0.12
NUP50-201ENST00000347635 EIF2AK1Q9BQI3 630 aaKnown RBP15.8■□□□□ 0.12
NUP50-201ENST00000347635 CHN1P15882 459 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 ZNF543Q08ER8 600 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 MEA1Q16626 185 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 DDX42Q86XP3 938 aaKnown RBP eCLIP15.8■□□□□ 0.12
NUP50-201ENST00000347635 MSL3Q8N5Y2 521 aaKnown RBP15.8■□□□□ 0.12
NUP50-201ENST00000347635 TBC1D22BQ9NU19 505 aa15.8■□□□□ 0.12
NUP50-201ENST00000347635 CNOT8Q9UFF9 292 aaKnown RBP15.8■□□□□ 0.12
NUP50-201ENST00000347635 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 AGTP01019 485 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 PDHBP11177 359 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 TAF12Q16514 161 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 REEP2Q9BRK0 252 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 PHF20L1A8MW92 1017 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 TRIM49P0CI25 452 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 TRIM49CP0CI26 452 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 CNGA1P29973 690 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 RASA3Q14644 834 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 CENPPQ6IPU0 288 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 FOXR1Q6PIV2 292 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 SPATA24Q86W54 205 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 AENQ8WTP8 325 aaKnown RBP15.79■□□□□ 0.12
NUP50-201ENST00000347635 GTF3C2Q8WUA4 911 aaPredicted RBP15.79■□□□□ 0.12
NUP50-201ENST00000347635 GBP5Q96PP8 586 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 STK33Q9BYT3 514 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 ANAPC7Q9UJX3 599 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 RIC1Q4ADV7 1423 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 ABCC6O95255 1503 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 PALM3A6NDB9 673 aaPredicted RBP15.79■□□□□ 0.12
NUP50-201ENST00000347635 MAPK13O15264 365 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 EYA4O95677 639 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 SPP2Q13103 211 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 TTBK2Q6IQ55 1244 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 NSUN6Q8TEA1 469 aaKnown RBP15.79■□□□□ 0.12
NUP50-201ENST00000347635 PRMT1Q99873 361 aaKnown RBP15.79■□□□□ 0.12
NUP50-201ENST00000347635 AGPAT1Q99943 283 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 ECT2Q9H8V3 914 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 SLC37A4O43826 429 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 FGFR4P22455 802 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 TKFCQ3LXA3 575 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 DEFB132Q7Z7B7 95 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 XXYLT1Q8NBI6 393 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 XPO6Q96QU8 1125 aaKnown RBP15.79■□□□□ 0.12
NUP50-201ENST00000347635 ATRNO75882 1429 aa15.79■□□□□ 0.12
NUP50-201ENST00000347635 WDR46O15213 610 aaKnown RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 TNNC2P02585 160 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 CA8P35219 290 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 VAMP7P51809 220 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 STXBP2Q15833 593 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 KLHDC7AQ5VTJ3 777 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 SEPT14Q6ZU15 432 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 ANKFY1Q9P2R3 1169 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 SUCLA2Q9P2R7 463 aaPredicted RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 LCMT1Q9UIC8 334 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 TCHHQ07283 1943 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 FAM47CQ5HY64 1035 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 ZNF746Q6NUN9 644 aaPredicted RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 SEPT9Q9UHD8 586 aaPredicted RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 PHF2O75151 1096 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 STK10O94804 968 aaKnown RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 PLS3P13797 630 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 LRRC14Q15048 493 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 NCAPGQ9BPX3 1015 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms