RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 H0YCG3 227 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 GOLGA6L22H0YM25 854 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
SNCA-202ENST00000345009 DARSP14868 501 aaKnown RBP13.09□□□□□ -0.31
SNCA-202ENST00000345009 SCP2P22307 547 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 ABCD1P33897 745 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 SYKP43405 635 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 NAMPTP43490 491 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 KCNJ6P48051 423 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 EFNA5P52803 228 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
SNCA-202ENST00000345009 LPIN1Q14693 890 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 DBF4BQ8NFT6 615 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 CHAMP1Q96JM3 812 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 PPP1R16BQ96T49 567 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 FDXACB1Q9BRP7 624 aaPredicted RBP13.09□□□□□ -0.31
SNCA-202ENST00000345009 RUSC1Q9BVN2 902 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 NFKBIZQ9BYH8 718 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 TNMDQ9H2S6 317 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 BLOC1S4Q9NUP1 217 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 TCHHQ07283 1943 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
SNCA-202ENST00000345009 A0A1B0GVL5 298 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 ZBBXA8MT70 800 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 HIP1RO75146 1068 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 FAM13AO94988 1023 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 SLFN14P0C7P3 912 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 PFKFB1P16118 471 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 ZSCAN20P17040 1043 aaPredicted RBP13.08□□□□□ -0.32
SNCA-202ENST00000345009 GLRA2P23416 452 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 CD52P31358 61 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 PTENP60484 403 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 KANK3Q6NY19 840 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 KSR1Q8IVT5 923 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 SLC17A8Q8NDX2 589 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 RNPC3Q96LT9 517 aaKnown RBP13.08□□□□□ -0.32
SNCA-202ENST00000345009 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNCA-202ENST00000345009 CDHR5Q9HBB8 845 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 PARVGQ9HBI0 331 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 GPRC5CQ9NQ84 441 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 PADI3Q9ULW8 664 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 ST3GAL5Q9UNP4 418 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 NOC2LQ9Y3T9 749 aaKnown RBP13.08□□□□□ -0.32
SNCA-202ENST00000345009 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
SNCA-202ENST00000345009 DENND3A2RUS2 1198 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 ERLIN2O94905 339 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 PLS3P13797 630 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 RAD51AP2Q09MP3 1159 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 GPNMBQ14956 572 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 NAALADL2Q58DX5 795 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 ARSHQ5FYA8 562 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 TDHQ8IZJ6 230 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 ZNF668Q96K58 619 aaPredicted RBP13.07□□□□□ -0.32
SNCA-202ENST00000345009 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 AGO3Q9H9G7 860 aaKnown RBP13.07□□□□□ -0.32
SNCA-202ENST00000345009 IFT122Q9HBG6 1241 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 KMT5AQ9NQR1 393 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 KBTBD4Q9NVX7 518 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 DACT1Q9NYF0 836 aa13.07□□□□□ -0.32
SNCA-202ENST00000345009 HOOK1Q9UJC3 728 aaKnown RBP13.07□□□□□ -0.32
SNCA-202ENST00000345009 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
SNCA-202ENST00000345009 A0A087X0B3 334 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 K7ERI5 159 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 AMHP03971 560 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 MYL1P05976 194 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 GAP43P17677 238 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 EPHB4P54760 987 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 PEX3P56589 373 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 CAPSQ13938 189 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 SHHQ15465 462 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 E2F4Q16254 413 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 MAPK6Q16659 721 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 TMEM132AQ24JP5 1023 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 CLEC17AQ6ZS10 378 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 CCDC65Q8IXS2 484 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 PHOSPHO2Q8TCD6 241 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 DDX12PQ92771 950 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 PRIMPOLQ96LW4 560 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
SNCA-202ENST00000345009 ERVK-5Q9HDB9 667 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms