RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 EEPD1Q7L9B9 569 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 SLC9A9Q8IVB4 645 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 KSR1Q8IVT5 923 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 SEPT1Q8WYJ6 367 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 HVCN1Q96D96 273 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 PDE11AQ9HCR9 933 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 PDLIM7Q9NR12 457 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 NRBP2Q9NSY0 501 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 DMAC2Q9NW81 257 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 VPS18Q9P253 973 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 IVNS1ABPQ9Y6Y0 642 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 AKAP3O75969 853 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 OATP04181 439 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 XRCC5P13010 732 aaKnown RBP13.98□□□□□ -0.17
CLK3-201ENST00000345005 TNNT3P45378 269 aaPredicted RBP13.98□□□□□ -0.17
CLK3-201ENST00000345005 KLK7P49862 253 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 HUNKP57058 714 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 KCNH2Q12809 1159 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 DMP1Q13316 513 aaPredicted RBP13.98□□□□□ -0.17
CLK3-201ENST00000345005 CASP8Q14790 479 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 LY6KQ17RY6 165 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 CCDC70Q6NSX1 233 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 TMEM174Q8WUU8 243 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 SPIRE2Q8WWL2 714 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 NTPCRQ9BSD7 190 aaKnown RBP13.98□□□□□ -0.17
CLK3-201ENST00000345005 NIFKQ9BYG3 293 aaKnown RBP13.98□□□□□ -0.17
CLK3-201ENST00000345005 ATP6V0A4Q9HBG4 840 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 ABCB6Q9NP58 842 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 GPRC5CQ9NQ84 441 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 AGPAT3Q9NRZ7 376 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 AGPAT5Q9NUQ2 364 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
CLK3-201ENST00000345005 EXOC7Q9UPT5 735 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 FRMD4BQ9Y2L6 1034 aa13.98□□□□□ -0.17
CLK3-201ENST00000345005 A6NNZ2 444 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 SLC16A4O15374 487 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 ABCD1P33897 745 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 AARSP49588 968 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLK3-201ENST00000345005 CASP4P49662 377 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 STAT5BP51692 787 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 TUBB8Q3ZCM7 444 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 CELF3Q5SZQ8 465 aaKnown RBP13.97□□□□□ -0.17
CLK3-201ENST00000345005 FAM186BQ8IYM0 893 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 SLC35F6Q8N357 371 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 EPC1Q9H2F5 836 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 KMT5AQ9NQR1 393 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 CCDC169A6NNP5 214 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 H0YCG3 227 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 MYO1CO00159 1063 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 AFPP02771 609 aaKnown RBP13.97□□□□□ -0.17
CLK3-201ENST00000345005 HSPA6P17066 643 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 ATP4AP20648 1035 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 ADORA2AP29274 412 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 NPTX2P47972 431 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 KCNMA1Q12791 1236 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 MTF1Q14872 753 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 MEA1Q16626 185 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 MTERF2Q49AM1 385 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 CCDC62Q6P9F0 684 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 ZNF467Q7Z7K2 595 aaPredicted RBP13.97□□□□□ -0.17
CLK3-201ENST00000345005 SRLQ86TD4 932 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 C12orf56Q8IXR9 622 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 DHX37Q8IY37 1157 aaKnown RBP13.97□□□□□ -0.17
CLK3-201ENST00000345005 SCFD2Q8WU76 684 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 BORCS6Q96GS4 357 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 IFT74Q96LB3 600 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 PTPN18Q99952 460 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 AZI2Q9H6S1 392 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 FAM207AQ9NSI2 230 aaPredicted RBP13.97□□□□□ -0.17
CLK3-201ENST00000345005 PPME1Q9Y570 386 aa13.97□□□□□ -0.17
CLK3-201ENST00000345005 H3BQF6 201 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 NOP56O00567 594 aaKnown RBP13.96□□□□□ -0.17
CLK3-201ENST00000345005 ARIH2O95376 493 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 SCP2P22307 547 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 TCF7P36402 384 aaPredicted RBP13.96□□□□□ -0.17
CLK3-201ENST00000345005 POLGP54098 1239 aaPredicted RBP13.96□□□□□ -0.17
CLK3-201ENST00000345005 FAM110CQ1W6H9 321 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 ARMCX2Q7L311 632 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 TMEM161BQ8NDZ6 487 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 FAM167AQ96KS9 214 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 PCYT2Q99447 389 aa13.96□□□□□ -0.17
CLK3-201ENST00000345005 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
CLK3-201ENST00000345005 RRP15Q9Y3B9 282 aaKnown RBP13.96□□□□□ -0.17
CLK3-201ENST00000345005 EPN1Q9Y6I3 576 aaPredicted RBP13.96□□□□□ -0.17
CLK3-201ENST00000345005 EXOC3O60645 756 aa13.95□□□□□ -0.18
CLK3-201ENST00000345005 TXNP10599 105 aaKnown RBP13.95□□□□□ -0.18
CLK3-201ENST00000345005 MAPK4P31152 587 aa13.95□□□□□ -0.18
CLK3-201ENST00000345005 HNRNPH3P31942 346 aaKnown RBP13.95□□□□□ -0.18
CLK3-201ENST00000345005 RFC5P40937 340 aa13.95□□□□□ -0.18
CLK3-201ENST00000345005 CYP2J2P51589 502 aa13.95□□□□□ -0.18
CLK3-201ENST00000345005 ZNF157P51786 506 aaPredicted RBP13.95□□□□□ -0.18
CLK3-201ENST00000345005 CDK17Q00537 523 aa13.95□□□□□ -0.18
CLK3-201ENST00000345005 EMC2Q15006 297 aa13.95□□□□□ -0.18
CLK3-201ENST00000345005 FBXO16Q8IX29 292 aaPredicted RBP13.95□□□□□ -0.18
CLK3-201ENST00000345005 PNKPQ96T60 521 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms