RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 UBAP2Q5T6F2 1119 aaKnown RBP16.97■□□□□ 0.31
CLCN2-202ENST00000344937 CDCA2Q69YH5 1023 aaPredicted RBP16.97■□□□□ 0.31
CLCN2-202ENST00000344937 H2AFVQ71UI9 128 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 LMBR1Q8WVP7 490 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 CUL5Q93034 780 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
CLCN2-202ENST00000344937 TNFRSF8P28908 595 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 PSMD2Q13200 908 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
CLCN2-202ENST00000344937 CCDC25Q86WR0 208 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 TPCN2Q8NHX9 752 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 PIGOQ8TEQ8 1089 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 SEC16BQ96JE7 1060 aa16.97■□□□□ 0.31
CLCN2-202ENST00000344937 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.315e-7■■■□□ 18.9
CLCN2-202ENST00000344937 NUCKS1Q9H1E3 243 aaKnown RBP16.97■□□□□ 0.31
CLCN2-202ENST00000344937 DRP2Q13474 957 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 PDIA5Q14554 519 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 ARSHQ5FYA8 562 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 ARFGAP2Q8N6H7 521 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 MGARPQ8TDB4 240 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 GLIS2Q9BZE0 524 aaPredicted RBP16.96■□□□□ 0.31
CLCN2-202ENST00000344937 MLXIPLQ9NP71 852 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 ENO4A6NNW6 628 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 CAND2O75155 1236 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 AFPP02771 609 aaKnown RBP16.96■□□□□ 0.31
CLCN2-202ENST00000344937 PPP2R2AP63151 447 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 MAEAQ7L5Y9 396 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 THOC1Q96FV9 657 aaKnown RBP16.96■□□□□ 0.31
CLCN2-202ENST00000344937 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 KCTD10Q9H3F6 313 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 PLCB1Q9NQ66 1216 aa16.96■□□□□ 0.31
CLCN2-202ENST00000344937 UTP11Q9Y3A2 253 aaKnown RBP16.96■□□□□ 0.31
CLCN2-202ENST00000344937 FLOT1O75955 427 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 SLC8A1P32418 973 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 GALCP54803 685 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 CACNA2D3Q8IZS8 1091 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 REEP2Q9BRK0 252 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 BHMT2Q9H2M3 363 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 ACTR5Q9H9F9 607 aaPredicted RBP16.95■□□□□ 0.3
CLCN2-202ENST00000344937 HERC5Q9UII4 1024 aaKnown RBP16.95■□□□□ 0.3
CLCN2-202ENST00000344937 PPP1R9AQ9ULJ8 1098 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 ZBTB39O15060 712 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 CYP2W1Q8TAV3 490 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 DCAF4Q8WV16 495 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 RSRC1Q96IZ7 334 aaKnown RBP16.95■□□□□ 0.3
CLCN2-202ENST00000344937 RGL1Q9NZL6 768 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 AIPL1Q9NZN9 384 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 CD2APQ9Y5K6 639 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 FER1L6Q2WGJ9 1857 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 HOXA13P31271 388 aaPredicted RBP16.95■□□□□ 0.3
CLCN2-202ENST00000344937 PTGER2P43116 358 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 SNX1Q13596 522 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 ZC2HC1CQ53FD0 456 aaPredicted RBP16.95■□□□□ 0.3
CLCN2-202ENST00000344937 RUBCNQ92622 972 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 ITFG2Q969R8 447 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 GGA2Q9UJY4 613 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 PTPN22Q9Y2R2 807 aa16.95■□□□□ 0.3
CLCN2-202ENST00000344937 DDX3XO00571 662 aaKnown RBP eCLIP16.94■□□□□ 0.37e-10■■■□□ 16.5
CLCN2-202ENST00000344937 TRIM49P0CI25 452 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 TRIM49CP0CI26 452 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 CYP2J2P51589 502 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 RASA3Q14644 834 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 FAM133BQ5BKY9 247 aaKnown RBP16.94■□□□□ 0.3
CLCN2-202ENST00000344937 RUFY4Q6ZNE9 571 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
CLCN2-202ENST00000344937 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 ZBTB21Q9ULJ3 1066 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 H0YGN5 161 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 GMPSP49915 693 aaPredicted RBP16.94■□□□□ 0.3
CLCN2-202ENST00000344937 RWDD2BP57060 319 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 OTUD6AQ7L8S5 288 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 MREGQ8N565 214 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 SCFD2Q8WU76 684 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 EDEM3Q9BZQ6 932 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 DNAJC17Q9NVM6 304 aaKnown RBP16.94■□□□□ 0.3
CLCN2-202ENST00000344937 TAS2R14Q9NYV8 317 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLCN2-202ENST00000344937 NFS1Q9Y697 457 aa16.94■□□□□ 0.3
CLCN2-202ENST00000344937 VIMP08670 466 aaKnown RBP16.93■□□□□ 0.3
CLCN2-202ENST00000344937 BMP3P12645 472 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 UBXN2AP68543 259 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 COG2Q14746 738 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 PPP1R7Q15435 360 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 ANKRD20A8PQ5CZ79 823 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 ZNF746Q6NUN9 644 aaPredicted RBP16.93■□□□□ 0.3
CLCN2-202ENST00000344937 VPS36Q86VN1 386 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 TCP11Q8WWU5 503 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 FMO2Q99518 471 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 ERVK-5Q9HDB9 667 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
CLCN2-202ENST00000344937 IGSF9BQ9UPX0 1349 aa16.93■□□□□ 0.3
CLCN2-202ENST00000344937 FOXO6A8MYZ6 492 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms