RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SRGAP2CP0DJJ0 459 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.16
HMGN3-202ENST00000344726 MCM2P49736 904 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 CLUL1Q15846 466 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 SPOUT1Q5T280 376 aaKnown RBP16.08■□□□□ 0.16
HMGN3-202ENST00000344726 FERMT3Q86UX7 667 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 FAM178BQ8IXR5 827 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 EXOC8Q8IYI6 725 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 HELQQ8TDG4 1101 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 MTRQ99707 1265 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 IGFLR1Q9H665 355 aa16.08■□□□□ 0.16
HMGN3-202ENST00000344726 NOL7Q9UMY1 257 aaKnown RBP16.08■□□□□ 0.16
HMGN3-202ENST00000344726 GAS2O43903 313 aaKnown RBP16.07■□□□□ 0.16
HMGN3-202ENST00000344726 GLP2RO95838 553 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 PHKA2P46019 1235 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 ERVFC1P60507 584 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 RBM10P98175 930 aaKnown RBP16.07■□□□□ 0.16
HMGN3-202ENST00000344726 ADAM15Q13444 863 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 POTEGQ6S5H5 508 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 CATSPER4Q7RTX7 472 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 ASAP3Q8TDY4 903 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 TCP11Q8WWU5 503 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 LPPQ93052 612 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
HMGN3-202ENST00000344726 INO80BQ9C086 356 aaPredicted RBP16.07■□□□□ 0.16
HMGN3-202ENST00000344726 TUFT1Q9NNX1 390 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 CHST12Q9NRB3 414 aa16.07■□□□□ 0.16
HMGN3-202ENST00000344726 PIN4Q9Y237 131 aaKnown RBP16.07■□□□□ 0.16
HMGN3-202ENST00000344726 FSCN2O14926 492 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 DGAT1O75907 488 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 LAG3P18627 525 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 RPA1P27694 616 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 PTGDRQ13258 359 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 IL17AQ16552 155 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 ECM1Q16610 540 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 LONRF3Q496Y0 759 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 MCTP1Q6DN14 999 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 SRGAP1Q7Z6B7 1085 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 RBM23Q86U06 439 aaKnown RBP16.06■□□□□ 0.16
HMGN3-202ENST00000344726 THNSL1Q8IYQ7 743 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 LRRC43Q8N309 656 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 RNF149Q8NC42 400 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 EPHX3Q9H6B9 360 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 DACT1Q9NYF0 836 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 CLEC1BQ9P126 229 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
HMGN3-202ENST00000344726 ASAP2O43150 1006 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 HOXA2O43364 376 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 USO1O60763 962 aaKnown RBP16.05■□□□□ 0.16
HMGN3-202ENST00000344726 EOMESO95936 686 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
HMGN3-202ENST00000344726 GLRA2P23416 452 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 HOXA11P31270 313 aaPredicted RBP16.05■□□□□ 0.16
HMGN3-202ENST00000344726 ARL2P36404 184 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 NRIP1P48552 1158 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 CAPSQ13938 189 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 UBXN11Q5T124 520 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 TWF2Q6IBS0 349 aaKnown RBP16.05■□□□□ 0.16
HMGN3-202ENST00000344726 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 VN1R2Q8NFZ6 395 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 MSLNLQ96KJ4 702 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 GPRC5CQ9NQ84 441 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 TLR9Q9NR96 1032 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
HMGN3-202ENST00000344726 AAASQ9NRG9 546 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 FAM105AQ9NUU6 356 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
HMGN3-202ENST00000344726 PER2O15055 1255 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 NCK2O43639 380 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 B4GALT3O60512 393 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 PTENP60484 403 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 PLCB3Q01970 1234 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 UBE3AQ05086 875 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 CUL4AQ13619 759 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 MXD4Q14582 209 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 TMEM173Q86WV6 379 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 EFHBQ8N7U6 833 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 IGSF22Q8N9C0 903 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 NACC1Q96RE7 527 aa16.04■□□□□ 0.16
HMGN3-202ENST00000344726 POLR3FQ9H1D9 316 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 DBR1Q9UK59 544 aaKnown RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 BARX2Q9UMQ3 279 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 TDRD15B5MCY1 1934 aaKnown RBP16.04■□□□□ 0.16
HMGN3-202ENST00000344726 PP2D1A8MPX8 630 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 MBTPS2O43462 519 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 AFF1P51825 1210 aaKnown RBP16.03■□□□□ 0.16
HMGN3-202ENST00000344726 ZP2Q05996 745 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 PUS10Q3MIT2 529 aaKnown RBP16.03■□□□□ 0.16
HMGN3-202ENST00000344726 MAEAQ7L5Y9 396 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 ABI1Q8IZP0 508 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 SLC39A11Q8N1S5 342 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 ERMNQ8TAM6 284 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 MRPS27Q92552 414 aaKnown RBP16.03■□□□□ 0.16
HMGN3-202ENST00000344726 ZNF558Q96NG5 402 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms