RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ERVFC1P60507 584 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 EPHA7Q15375 998 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 CES5AQ6NT32 575 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 ANKRD54Q6NXT1 300 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 ANO5Q75V66 913 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 TMC7Q7Z402 723 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 KSR1Q8IVT5 923 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 SLFN12Q8IYM2 578 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 NSUN7Q8NE18 718 aaKnown RBP13.89□□□□□ -0.19
SGCA-202ENST00000344627 PBXIP1Q96AQ6 731 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 NLRP4Q96MN2 994 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 FDXACB1Q9BRP7 624 aaPredicted RBP13.89□□□□□ -0.19
SGCA-202ENST00000344627 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 RGL1Q9NZL6 768 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 HCSTQ9UBK5 93 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 C5orf42Q9H799 3197 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 PLXNA4Q9HCM2 1894 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 BTBD18B2RXH4 712 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 TBX3O15119 743 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 ATP2B1P20020 1258 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 GUCY1B3Q02153 619 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 CYP4A11Q02928 519 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 CTTNQ14247 550 aaKnown RBP13.88□□□□□ -0.19
SGCA-202ENST00000344627 PCBP1Q15365 356 aaKnown RBP eCLIP13.88□□□□□ -0.19
SGCA-202ENST00000344627 SAFBQ15424 915 aaKnown RBP eCLIP13.88□□□□□ -0.19
SGCA-202ENST00000344627 CALCRLQ16602 461 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 TWF2Q6IBS0 349 aaKnown RBP13.88□□□□□ -0.19
SGCA-202ENST00000344627 OTUD6AQ7L8S5 288 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 ALYREFQ86V81 257 aaKnown RBP13.88□□□□□ -0.19
SGCA-202ENST00000344627 TPH2Q8IWU9 490 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 UBALD2Q8IYN6 164 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 MRPL43Q8N983 215 aaKnown RBP13.88□□□□□ -0.19
SGCA-202ENST00000344627 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 HAS1Q92839 578 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 TMEM169Q96HH4 297 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 DYDC2Q96IM9 177 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 LXNQ9BS40 222 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 S1PR5Q9H228 398 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
SGCA-202ENST00000344627 DZANK1Q9NVP4 752 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 DAXXQ9UER7 740 aaPredicted RBP13.88□□□□□ -0.19
SGCA-202ENST00000344627 IRAK3Q9Y616 596 aa13.88□□□□□ -0.19
SGCA-202ENST00000344627 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 PER2O15055 1255 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
SGCA-202ENST00000344627 ZNF623O75123 536 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 MAFO75444 373 aaPredicted RBP13.87□□□□□ -0.19
SGCA-202ENST00000344627 SRGAP2CP0DJJ0 459 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 TECP42680 631 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 MTHFRP42898 656 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 MRE11P49959 708 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 PTPN21Q16825 1174 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 LONRF3Q496Y0 759 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 XKR9Q5GH70 373 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 PLPP4Q5VZY2 271 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 CATSPER4Q7RTX7 472 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 ZNF598Q86UK7 904 aaKnown RBP13.87□□□□□ -0.19
SGCA-202ENST00000344627 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 DIS3L2Q8IYB7 885 aaKnown RBP13.87□□□□□ -0.19
SGCA-202ENST00000344627 SLC39A11Q8N1S5 342 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 FBXL6Q8N531 539 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
SGCA-202ENST00000344627 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 TMEM143Q96AN5 459 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
SGCA-202ENST00000344627 CEP89Q96ST8 783 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 PCDHA12Q9UN75 941 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 LIMCH1Q9UPQ0 1083 aa13.87□□□□□ -0.19
SGCA-202ENST00000344627 PIN4Q9Y237 131 aaKnown RBP13.87□□□□□ -0.19
SGCA-202ENST00000344627 NEMFO60524 1076 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 YWHABP31946 246 aaKnown RBP13.86□□□□□ -0.19
SGCA-202ENST00000344627 TXKP42681 527 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 GLB1LQ6UWU2 654 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 LRRC55Q6ZSA7 311 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 HELQQ8TDG4 1101 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 PSPC1Q8WXF1 523 aaKnown RBP13.86□□□□□ -0.19
SGCA-202ENST00000344627 RPGRIP1Q96KN7 1286 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 ADAM7Q9H2U9 754 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 ZSWIM4Q9H7M6 989 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 RNF19AQ9NV58 838 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 KANSL3Q9P2N6 904 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 WRAP73Q9P2S5 460 aaPredicted RBP13.86□□□□□ -0.19
SGCA-202ENST00000344627 USTQ9Y2C2 406 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 PCDHGC5Q9Y5F6 944 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 COL4A3BPQ9Y5P4 624 aa13.86□□□□□ -0.19
SGCA-202ENST00000344627 ZBTB39O15060 712 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 ASAP2O43150 1006 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 CA8P35219 290 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 PBX3P40426 434 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 RFC5P40937 340 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 PHKA2P46019 1235 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 GNL2Q13823 731 aaKnown RBP13.85□□□□□ -0.19
SGCA-202ENST00000344627 CNNM3Q8NE01 707 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 TCP11Q8WWU5 503 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms