RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
ZNF540-202ENST00000343599 NEMFO60524 1076 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 SASH3O75995 380 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 CHMLP26374 656 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 MNAT1P51948 309 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 XKR5Q6UX68 686 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 SLC24A5Q71RS6 500 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 GPR149Q86SP6 731 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 PLA2G4DQ86XP0 818 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 COLGALT1Q8NBJ5 622 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 UROC1Q96N76 676 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 IRX2Q9BZI1 471 aaPredicted RBP8.12□□□□□ -1.11
ZNF540-202ENST00000343599 PIF1Q9H611 641 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 LY9Q9HBG7 655 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 MAFBQ9Y5Q3 323 aaPredicted RBP8.12□□□□□ -1.11
ZNF540-202ENST00000343599 COL4A3Q01955 1670 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 C2orf16Q68DN1 1984 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.12□□□□□ -1.11
ZNF540-202ENST00000343599 NEBLO76041 1014 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 CDC25BP30305 580 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 CRYMQ14894 314 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 TSNAXIP1Q2TAA8 658 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 ARHGAP29Q52LW3 1261 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 B3GNT9Q6UX72 402 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 KLHL23Q8NBE8 558 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 UBXN4Q92575 508 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 GLG1Q92896 1179 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 ZSCAN10Q96SZ4 725 aaPredicted RBP8.12□□□□□ -1.11
ZNF540-202ENST00000343599 RIT2Q99578 217 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 SH3GL3Q99963 347 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 LNPKQ9C0E8 428 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 CWH43Q9H720 699 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 DACT1Q9NYF0 836 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
ZNF540-202ENST00000343599 MYH15Q9Y2K3 1946 aa8.12□□□□□ -1.11
ZNF540-202ENST00000343599 MYH9P35579 1960 aaKnown RBP8.12□□□□□ -1.11
ZNF540-202ENST00000343599 TMCO5BA8MYB1 307 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 DPYSL4O14531 572 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 KCNA2P16389 499 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 PFKPQ01813 784 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 AP1ARQ63HQ0 302 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 FOXR1Q6PIV2 292 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 SLC39A11Q8N1S5 342 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 ZNF483Q8TF39 744 aaPredicted RBP8.11□□□□□ -1.11
ZNF540-202ENST00000343599 ZBP1Q9H171 429 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
ZNF540-202ENST00000343599 RTN2O75298 545 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 MYL3P08590 195 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 PARP1P09874 1014 aaKnown RBP8.11□□□□□ -1.11
ZNF540-202ENST00000343599 SETDB1Q15047 1291 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 ANKRD45Q5TZF3 282 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 CXCL17Q6UXB2 119 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 CHD1LQ86WJ1 897 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 RUFY2Q8WXA3 655 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 TLR9Q9NR96 1032 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 ABCB7O75027 752 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 ECI2O75521 394 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 TUBB4AP04350 444 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 PGK2P07205 417 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 CTSAP10619 480 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 PAX7P23759 505 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 SERPINB4P48594 390 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 RWDD2BP57060 319 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 LPIN1Q14693 890 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 PPP2R5DQ14738 602 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 PI16Q6UXB8 463 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 SRGAP1Q7Z6B7 1085 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 NETO1Q8TDF5 533 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 CACTINQ8WUQ7 758 aaKnown RBP8.11□□□□□ -1.11
ZNF540-202ENST00000343599 PGBD4Q96DM1 585 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 KLHL5Q96PQ7 755 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 GPR88Q9GZN0 384 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 DLGAP2Q9P1A6 1054 aa8.11□□□□□ -1.11
ZNF540-202ENST00000343599 USP27XA6NNY8 438 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 CDC45O75419 566 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 HOXD12P35452 270 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 SREBF1P36956 1147 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 CCT2P78371 535 aaKnown RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 KRT76Q01546 638 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 CDC37Q16543 378 aaPredicted RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 TCEAL5Q5H9L2 206 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 ZNF618Q5T7W0 954 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 LRRC31Q6UY01 552 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 ZBTB44Q8NCP5 570 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 CCDC12Q8WUD4 166 aaPredicted RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 TIPINQ9BVW5 301 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 CELF4Q9BZC1 486 aaKnown RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 M0R2C6 588 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 OPLAHO14841 1288 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 RFC5P40937 340 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 USP11P51784 963 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 ZNF75DP51815 510 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 JAK3P52333 1124 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 ATN1P54259 1190 aaPredicted RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 KYAT1Q16773 422 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 PEAR1Q5VY43 1037 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms