RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 ARID2Q68CP9 1835 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 LINC01553A4QN01 128 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CUTAO60888 179 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CSDE1O75534 798 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ERLIN2O94905 339 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 UPP2O95045 317 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SCP2P22307 547 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 FGFR4P22455 802 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ERVK-21P61565 698 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 NUCB2P80303 420 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KARSQ15046 597 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 AMHR2Q16671 573 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 FOXD4L5Q5VV16 416 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 Q7L0L9 218 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZBTB8OSQ8IWT0 167 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DAW1Q8N136 415 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 FOXD4L4Q8WXT5 416 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 LARP4BQ92615 738 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 NTPCRQ9BSD7 190 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RUSC1Q9BVN2 902 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 FZD8Q9H461 694 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PRMT7Q9NVM4 692 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 LRFN2Q9ULH4 789 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ODF2LQ9ULJ1 636 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PIN4Q9Y237 131 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RWDD3Q9Y3V2 267 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ADGRA3Q8IWK6 1321 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TTC3P53804 2025 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 LCHNA4D1U4 455 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 LRRIQ4A6NIV6 560 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 INO80B-WBP1J3KQ70 363 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TSPAN1O60635 241 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DNM1Q05193 864 aaKnown RBP14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MAPK7Q13164 816 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 AXDND1Q5T1B0 1012 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CCDC73Q6ZRK6 1079 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 USP49Q70CQ1 688 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MAEAQ7L5Y9 396 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZNF598Q86UK7 904 aaKnown RBP14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ECHDC2Q86YB7 292 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SPIRE2Q8WWL2 714 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 BSNDQ8WZ55 320 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CLP1Q92989 425 aaKnown RBP14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TGS1Q96RS0 853 aaKnown RBP14.46□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CHD9Q3L8U1 2897 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 HIP1RO75146 1068 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 KRT85P78386 507 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 DMP1Q13316 513 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 GRIN2CQ14957 1233 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ARSHQ5FYA8 562 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SPECC1Q5M775 1068 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 RRAGBQ5VZM2 374 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 TWF2Q6IBS0 349 aaKnown RBP14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 NOTUMQ6P988 496 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CNNM3Q8NE01 707 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LRRC15Q8TF66 581 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PLIN2Q99541 437 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CCDC113Q9H0I3 377 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CDH23Q9H251 3354 aa14.45□□□□□ -0.1
HLA-DQA1-201ENST00000343139 A0A1B0GUA9 196 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 RBAK-RBAKDNI3L0D1 243 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ACKR2O00590 384 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ARHGEF15O94989 841 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SLC34A2O95436 690 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SSBP05455 408 aaKnown RBP eCLIP14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PLS3P13797 630 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 POU3F3P20264 500 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 NPTX2P47972 431 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ZNF131P52739 623 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 MAPK6Q16659 721 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 NAALADL2Q58DX5 795 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 MRPL10Q7Z7H8 261 aaKnown RBP14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FIBCD1Q8N539 461 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 DEPTORQ8TB45 409 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CDX2Q99626 313 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SCAND2PQ9GZW5 306 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CUEDC2Q9H467 287 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 TMEM134Q9H6X4 195 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FAM105AQ9NUU6 356 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LARSQ9P2J5 1176 aaKnown RBP14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ARHGAP28Q9P2N2 729 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 STXBP5LQ9Y2K9 1186 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PTPRSQ13332 1948 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LOXHD1Q8IVV2 1947 aa14.44□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CNTNAP2Q9UHC6 1331 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 C5orf67F2Z3F1 127 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 H0YCG3 227 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 RB1P06400 928 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LINC00271P0C7V0 271 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ATF7P17544 494 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ABCD1P33897 745 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SMTNP53814 917 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 BTG3Q14201 252 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PGBD4Q96DM1 585 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PYM1Q9BRP8 204 aaKnown RBP14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 TMEM117Q9H0C3 514 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PCDHA7Q9UN72 937 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms