RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TDRD12Q587J7 1177 aaKnown RBP21.81■■□□□ 1.08
RTN1-202ENST00000342503 CCDC122Q5T0U0 273 aa21.81■■□□□ 1.08
RTN1-202ENST00000342503 CCDC62Q6P9F0 684 aa21.81■■□□□ 1.08
RTN1-202ENST00000342503 MORF4L1Q9UBU8 362 aa21.81■■□□□ 1.08
RTN1-202ENST00000342503 FBXL5Q9UKA1 691 aa21.81■■□□□ 1.08
RTN1-202ENST00000342503 AJAP1Q9UKB5 411 aaPredicted RBP21.81■■□□□ 1.08
RTN1-202ENST00000342503 MAPK13O15264 365 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 GCLCP48506 637 aaPredicted RBP21.8■■□□□ 1.08
RTN1-202ENST00000342503 VAMP7P51809 220 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 VAV2P52735 878 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 DLG4P78352 724 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 MYL7Q01449 175 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 TARBP2Q15633 366 aaKnown RBP21.8■■□□□ 1.08
RTN1-202ENST00000342503 ZNF792Q3KQV3 632 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 COPS5Q92905 334 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 LACRTQ9GZZ8 138 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 PDGFCQ9NRA1 345 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 ARHGAP28Q9P2N2 729 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 PCDHA13Q9Y5I0 950 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 GOLGA8IPA6NC78 632 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 GOLGA8JA6NMD2 632 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 ZBTB48P10074 688 aaPredicted RBP21.8■■□□□ 1.08
RTN1-202ENST00000342503 CNGA1P29973 690 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 ARL2P36404 184 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 RFC5P40937 340 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 HSDL1Q3SXM5 330 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 TMEM63BQ5T3F8 832 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 SLC39A4Q6P5W5 647 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 GJB7Q6PEY0 223 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 ARMCX2Q7L311 632 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 TAS1R3Q7RTX0 852 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 DHX37Q8IY37 1157 aaKnown RBP21.8■■□□□ 1.08
RTN1-202ENST00000342503 ASAP3Q8TDY4 903 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 ERO1AQ96HE7 468 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 SPAG5Q96R06 1193 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 AZI2Q9H6S1 392 aa21.8■■□□□ 1.08
RTN1-202ENST00000342503 H0YCG3 227 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 NOP56O00567 594 aaKnown RBP21.79■■□□□ 1.08
RTN1-202ENST00000342503 KRT86O43790 486 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 LGR5O75473 907 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 TXNP10599 105 aaKnown RBP21.79■■□□□ 1.08
RTN1-202ENST00000342503 ADORA2AP29274 412 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 ARID5AQ03989 594 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 IQCEQ6IPM2 695 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 PLEKHO2Q8TD55 490 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 SLC7A3Q8WY07 619 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 INTS2Q9H0H0 1204 aaKnown RBP21.79■■□□□ 1.08
RTN1-202ENST00000342503 KCNG1Q9UIX4 513 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 MYO6Q9UM54 1294 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 EMSYQ7Z589 1322 aa21.79■■□□□ 1.08
RTN1-202ENST00000342503 ADRB2P07550 413 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 GLRA2P23416 452 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 JAM2P57087 298 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 GFPT1Q06210 699 aaPredicted RBP21.78■■□□□ 1.08
RTN1-202ENST00000342503 KLHL30Q0D2K2 578 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 TTLL4Q14679 1199 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 NAA30Q147X3 362 aaPredicted RBP21.78■■□□□ 1.08
RTN1-202ENST00000342503 C1orf220Q5T0J3 134 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 LRRN4CLQ8ND94 238 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 GLG1Q92896 1179 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 SAAL1Q96ER3 474 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 SPATA33Q96N06 139 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 PTPN18Q99952 460 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 IFIH1Q9BYX4 1025 aaKnown RBP21.78■■□□□ 1.08
RTN1-202ENST00000342503 MRFAP1Q9Y605 127 aa21.78■■□□□ 1.08
RTN1-202ENST00000342503 CST9Q5W186 159 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 IRF2BP2Q7Z5L9 587 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 FAM167AQ96KS9 214 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 TRPM7Q96QT4 1865 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 CTAGE9A4FU28 777 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 MARK3P27448 753 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 ABCD1P33897 745 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 MAGEA1P43355 309 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 NAMPTP43490 491 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 PPP3CAQ08209 521 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 KIF5AQ12840 1032 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 ENOX2Q16206 610 aaKnown RBP21.77■■□□□ 1.08
RTN1-202ENST00000342503 TRIM50Q86XT4 487 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 SCFD2Q8WU76 684 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 PARK7Q99497 189 aaKnown RBP21.77■■□□□ 1.08
RTN1-202ENST00000342503 NAPGQ99747 312 aaPredicted RBP21.77■■□□□ 1.08
RTN1-202ENST00000342503 TSGA10Q9BZW7 698 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 DIS3Q9Y2L1 958 aaKnown RBP21.77■■□□□ 1.08
RTN1-202ENST00000342503 DUSP10Q9Y6W6 482 aa21.77■■□□□ 1.08
RTN1-202ENST00000342503 RBAK-RBAKDNI3L0D1 243 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 N4BP1O75113 896 aaKnown RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 MAFO75444 373 aaPredicted RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 MCCD1P59942 119 aaPredicted RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 NCBP1Q09161 790 aaKnown RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 SNRNP35Q16560 246 aaKnown RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 BRDTQ58F21 947 aaPredicted RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 PLPPR4Q7Z2D5 763 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 ABRAQ8N0Z2 381 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 EHBP1Q8NDI1 1231 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 BBXQ8WY36 941 aaPredicted RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 POMGNT1Q8WZA1 660 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 BICD1Q96G01 975 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 NMRK2Q9NPI5 230 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms