RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ASTN1O14525 1302 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 SLC9A1P19634 815 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 SMTNP53814 917 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 CETPP11597 493 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 ADCYAP1R1P41586 468 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 GCLMP48507 274 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 STAT5BP51692 787 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 NOL9Q5SY16 702 aaKnown RBP14.21□□□□□ -0.13
COL18A1-201ENST00000342220 SLC7A3Q8WY07 619 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-201ENST00000342220 CCDC42Q96M95 316 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 POP1Q99575 1024 aaKnown RBP14.21□□□□□ -0.13
COL18A1-201ENST00000342220 DNAJC7Q99615 494 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 PNMA3Q9UL41 463 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 SRGAP2O75044 1071 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 ATP1A1P05023 1023 aaKnown RBP14.21□□□□□ -0.13
COL18A1-201ENST00000342220 ZNF286BP0CG31 522 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 RPL13P26373 211 aaKnown RBP14.21□□□□□ -0.13
COL18A1-201ENST00000342220 PSMD2Q13200 908 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 MAN2A1Q16706 1144 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 STXBP4Q6ZWJ1 553 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 RIOX2Q8IUF8 465 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 IFT74Q96LB3 600 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 HINFPQ9BQA5 517 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 POLR3FQ9H1D9 316 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-201ENST00000342220 CAPN11Q9UMQ6 739 aa14.21□□□□□ -0.13
COL18A1-201ENST00000342220 JAK3P52333 1124 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 MAP2K1Q02750 393 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-201ENST00000342220 LRRC63Q05C16 580 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 CCDC122Q5T0U0 273 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 PROCA1Q8NCQ7 364 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-201ENST00000342220 KCNA2P16389 499 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 CCNA1P78396 465 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 BIRC2Q13490 618 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 CASP8Q14790 479 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 TRAPPC11Q7Z392 1133 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 SUGP1Q8IWZ8 645 aaKnown RBP14.2□□□□□ -0.14
COL18A1-201ENST00000342220 FAM133AQ8N9E0 248 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 DEPTORQ8TB45 409 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 INPP4AQ96PE3 977 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-201ENST00000342220 FAM49AQ9H0Q0 323 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-201ENST00000342220 A0A1W2PQC6 194 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 CCDC189A1A4V9 331 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 KRT13P13646 458 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 DRP2Q13474 957 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 HAUS4Q9H6D7 363 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 RNF19AQ9NV58 838 aa14.2□□□□□ -0.14
COL18A1-201ENST00000342220 INO80B-WBP1J3KQ70 363 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 HTRA3P83110 453 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 SWT1Q5T5J6 900 aaKnown RBP14.19□□□□□ -0.14
COL18A1-201ENST00000342220 RHPN2Q8IUC4 686 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 CDHR1Q96JP9 859 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 CAPZA3Q96KX2 299 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 ZIC5Q96T25 663 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 MPHOSPH6Q99547 160 aaKnown RBP14.19□□□□□ -0.14
COL18A1-201ENST00000342220 INO80BQ9C086 356 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-201ENST00000342220 FAN1Q9Y2M0 1017 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 RCCD1A6NED2 376 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 LRRC53A6NM62 1247 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 DYNC1LI2O43237 492 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-201ENST00000342220 ACOT2P49753 483 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 GTF2A2P52657 109 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 TUBB4BP68371 445 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 ZNF720Q7Z2F6 126 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 DAW1Q8N136 415 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 GPRASP2Q96D09 838 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 MMS19Q96T76 1030 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 RASSF10A6NK89 507 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 PHACTR2O75167 634 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 CLCN3P51790 818 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 CST9Q5W186 159 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 LRRC55Q6ZSA7 311 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 ARMCX2Q7L311 632 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 GCNT4Q9P109 453 aa14.19□□□□□ -0.14
COL18A1-201ENST00000342220 LRRIQ3A6PVS8 624 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-201ENST00000342220 SSTR3P32745 418 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-201ENST00000342220 LIG4P49917 911 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 BIRC3Q13489 604 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 SH3D19Q5HYK7 790 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 BSNDQ8WZ55 320 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 FAM213AQ9BRX8 229 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 LACRTQ9GZZ8 138 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 SCP2P22307 547 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 SFNP31947 248 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 NPTX2P47972 431 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 OAZ1P54368 228 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 CORO7P57737 925 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 SPA17Q15506 151 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 EXOC3L4Q17RC7 722 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 GPAT2Q6NUI2 795 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 AFG1LQ8WV93 481 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 JAKMIP2Q96AA8 810 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 VTI1AQ96AJ9 217 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 ZBTB45Q96K62 511 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-201ENST00000342220 PTPN18Q99952 460 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 CYP26B1Q9NR63 512 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 DUSP10Q9Y6W6 482 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 PFASO15067 1338 aa14.18□□□□□ -0.14
COL18A1-201ENST00000342220 MKI67P46013 3256 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms