RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CYP39A1Q9NYL5 469 aa12.79□□□□□ -0.36
RTN3-203ENST00000341307 LRWD1Q9UFC0 647 aa12.79□□□□□ -0.36
RTN3-203ENST00000341307 CIDEBQ9UHD4 219 aa12.79□□□□□ -0.36
RTN3-203ENST00000341307 PAIP2BQ9ULR5 123 aaKnown RBP12.79□□□□□ -0.36
RTN3-203ENST00000341307 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
RTN3-203ENST00000341307 LUC7L2Q9Y383 392 aaKnown RBP12.79□□□□□ -0.36
RTN3-203ENST00000341307 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 TACC1O75410 805 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 MMEP08473 750 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 CYLC1P35663 651 aaPredicted RBP12.78□□□□□ -0.36
RTN3-203ENST00000341307 CCNFP41002 786 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 PTDSS1P48651 473 aaKnown RBP12.78□□□□□ -0.36
RTN3-203ENST00000341307 TSNAXIP1Q2TAA8 658 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 DACT2Q5SW24 774 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 SYMPKQ92797 1274 aaKnown RBP12.78□□□□□ -0.36
RTN3-203ENST00000341307 NHEJ1Q9H9Q4 299 aaPredicted RBP12.78□□□□□ -0.36
RTN3-203ENST00000341307 ETNK2Q9NVF9 386 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 SERPINB13Q9UIV8 391 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 SIGLEC16A6NMB1 481 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 SART1O43290 800 aaKnown RBP12.78□□□□□ -0.36
RTN3-203ENST00000341307 SUPT3HO75486 399 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 OXCT1P55809 520 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 UBXN1Q04323 297 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 IL17AQ16552 155 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 CCDC92Q53HC0 331 aaPredicted RBP12.78□□□□□ -0.36
RTN3-203ENST00000341307 ATP8B4Q8TF62 1192 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 ZNF333Q96JL9 665 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 MTMR4Q9NYA4 1195 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 PCDHA4Q9UN74 947 aa12.78□□□□□ -0.36
RTN3-203ENST00000341307 CEP350Q5VT06 3117 aa12.77□□□□□ -0.36
RTN3-203ENST00000341307 VARSP26640 1264 aaKnown RBP12.77□□□□□ -0.37
RTN3-203ENST00000341307 SHMT1P34896 483 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 RNASELQ05823 741 aaKnown RBP12.77□□□□□ -0.37
RTN3-203ENST00000341307 HHIPL2Q6UWX4 724 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.37
RTN3-203ENST00000341307 IFT74Q96LB3 600 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 PIGSQ96S52 555 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 KRT12Q99456 494 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 TLR10Q9BXR5 811 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 PPP1R12CQ9BZL4 782 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 NACA2Q9H009 215 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 CTNND2Q9UQB3 1225 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 CHMP2BQ9UQN3 213 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 SNX3O60493 162 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 MYBP10242 640 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 AFMP43652 599 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 ADCY1Q08828 1119 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 MYBPC2Q14324 1141 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 KRT26Q7Z3Y9 468 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 RTKN2Q8IZC4 609 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 ENDOVQ8N8Q3 282 aaKnown RBP12.77□□□□□ -0.37
RTN3-203ENST00000341307 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
RTN3-203ENST00000341307 STAMQ92783 540 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 GBP5Q96PP8 586 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 ADAM7Q9H2U9 754 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 RMND1Q9NWS8 449 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 PCDHA6Q9UN73 950 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 PCDHA8Q9Y5H6 950 aa12.77□□□□□ -0.37
RTN3-203ENST00000341307 DDTLA6NHG4 134 aaPredicted RBP12.76□□□□□ -0.37
RTN3-203ENST00000341307 RAD51CO43502 376 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 CEP104O60308 925 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 TCP11X2Q5H9J9 407 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 STRIP1Q5VSL9 837 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 RNF10Q8N5U6 811 aaKnown RBP12.76□□□□□ -0.37
RTN3-203ENST00000341307 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
RTN3-203ENST00000341307 NEUROG2Q9H2A3 272 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 LRCH1Q9Y2L9 728 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 A0A0J9YVX5 310 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 YDJCA8MPS7 323 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 M0R2N6 131 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 VCAM1P19320 739 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 FLT3P36888 993 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 ATP2C1P98194 919 aaPredicted RBP12.76□□□□□ -0.37
RTN3-203ENST00000341307 SULT2A1Q06520 285 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 DHX9Q08211 1270 aaKnown RBP12.76□□□□□ -0.37
RTN3-203ENST00000341307 RCN2Q14257 317 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 ATP11CQ8NB49 1132 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 GATA6Q92908 595 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 ISCUQ9H1K1 167 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 THAP9Q9H5L6 903 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 FBXL5Q9UKA1 691 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 SH3GLB1Q9Y371 365 aa12.76□□□□□ -0.37
RTN3-203ENST00000341307 ARFGEF1Q9Y6D6 1849 aa12.75□□□□□ -0.37
RTN3-203ENST00000341307 KCNJ18B7U540 433 aa12.75□□□□□ -0.37
RTN3-203ENST00000341307 CETN3O15182 167 aa12.75□□□□□ -0.37
RTN3-203ENST00000341307 RAD21O60216 631 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms