RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 CCDC113Q9H0I3 377 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
PERM1-201ENST00000341290 PPP1R12AO14974 1030 aaPredicted RBP16.51■□□□□ 0.23
PERM1-201ENST00000341290 BIRC3Q13489 604 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 NBPF9Q3BBW0 867 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 KIAA0825Q8IV33 1275 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 SYCE1Q8N0S2 351 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 RASGEF1CQ8N431 466 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 SLC20A1Q8WUM9 679 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 COA1Q9GZY4 146 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 ODF2LQ9ULJ1 636 aa16.51■□□□□ 0.23
PERM1-201ENST00000341290 G3V3G9 751 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 OPLAHO14841 1288 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
PERM1-201ENST00000341290 FERP16591 822 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 FBXO25Q8TCJ0 367 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 SLITRK6Q9H5Y7 841 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
PERM1-201ENST00000341290 PTPN22Q9Y2R2 807 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 TISP43B9A030 160 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 DDX3YO15523 660 aaKnown RBP16.5■□□□□ 0.23
PERM1-201ENST00000341290 ATMINO43313 823 aaPredicted RBP16.5■□□□□ 0.23
PERM1-201ENST00000341290 TNFAIP3P21580 790 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 MTMR3Q13615 1198 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 BYSLQ13895 437 aaKnown RBP16.5■□□□□ 0.23
PERM1-201ENST00000341290 CERKLQ49MI3 558 aaPredicted RBP16.5■□□□□ 0.23
PERM1-201ENST00000341290 CPNE8Q86YQ8 564 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 CACNA2D3Q8IZS8 1091 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 OLIG1Q8TAK6 271 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 KRT35Q92764 455 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 HOOK2Q96ED9 719 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 SCLT1Q96NL6 688 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 PCIF1Q9H4Z3 704 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 ACP6Q9NPH0 428 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 NENFQ9UMX5 172 aa16.5■□□□□ 0.23
PERM1-201ENST00000341290 CYP3A7-CYP3A51PA0A087WV96 503 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 CYP3A7P24462 503 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 IFNAR2P48551 515 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 FMO5P49326 533 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 IFI35P80217 286 aaPredicted RBP16.49■□□□□ 0.23
PERM1-201ENST00000341290 CCDC38Q502W7 563 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 YTHDF3Q7Z739 585 aaKnown RBP16.49■□□□□ 0.23
PERM1-201ENST00000341290 ELMO3Q96BJ8 720 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 DYDC2Q96IM9 177 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 ZC3H12CQ9C0D7 883 aaKnown RBP16.49■□□□□ 0.23
PERM1-201ENST00000341290 DAAM1Q9Y4D1 1078 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 FOXN3O00409 490 aaPredicted RBP16.49■□□□□ 0.23
PERM1-201ENST00000341290 PSMC2P35998 433 aaKnown RBP16.49■□□□□ 0.23
PERM1-201ENST00000341290 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
PERM1-201ENST00000341290 FBXO11Q86XK2 927 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 SLC30A5Q8TAD4 765 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 RFFLQ8WZ73 363 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 FAXDC2Q96IV6 333 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 SH2D3AQ9BRG2 576 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 AMNQ9BXJ7 453 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 PKD2L1Q9P0L9 805 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 GGT7Q9UJ14 662 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 SMCHD1A6NHR9 2005 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 ZMYM2Q9UBW7 1377 aa16.49■□□□□ 0.23
PERM1-201ENST00000341290 F5H6K3 240 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 SKAP2O75563 359 aaPredicted RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 FGFR4P22455 802 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 HOXA7P31268 230 aaPredicted RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 CDR1P51861 262 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 POU5F1Q01860 360 aaKnown RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 KLRC3Q07444 240 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 NAP1L4Q99733 375 aaKnown RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 AZI2Q9H6S1 392 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 MCM8Q9UJA3 840 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 VAV3Q9UKW4 847 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 CFBP00751 764 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 CHN1P15882 459 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 ICA1Q05084 483 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 SLC29A2Q14542 456 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 FAM43BQ6ZT52 329 aaPredicted RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 C1orf131Q8NDD1 294 aaKnown RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 BTBD6Q96KE9 485 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 GPR88Q9GZN0 384 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 CTTNBP2NLQ9P2B4 639 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 DLG4P78352 724 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 ANKRD20A8PQ5CZ79 823 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 GKAP1Q5VSY0 366 aaPredicted RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 PHLDB3Q6NSJ2 640 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.48■□□□□ 0.23
PERM1-201ENST00000341290 RNF25Q96BH1 459 aaPredicted RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 INTS2Q9H0H0 1204 aaKnown RBP16.48■□□□□ 0.23
PERM1-201ENST00000341290 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
PERM1-201ENST00000341290 ATXN2Q99700 1313 aaKnown RBP16.47■□□□□ 0.23
PERM1-201ENST00000341290 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
PERM1-201ENST00000341290 NFKBIEO00221 500 aa16.47■□□□□ 0.23
PERM1-201ENST00000341290 E2F5Q15329 346 aa16.47■□□□□ 0.23
PERM1-201ENST00000341290 JAMLQ86YT9 394 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms