RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 ANGPTL2Q9UKU9 493 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 PTCH1Q13635 1447 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 ADGRL3Q9HAR2 1447 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 CPB1P15086 417 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 MFSD14CQ5VZR4 134 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 TMEM35BQ8NCS4 154 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 FBXO41Q8TF61 875 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 CLCN6P51797 869 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 PSMC1P62191 440 aaKnown RBP12.14□□□□□ -0.47
TNC-201ENST00000341037 ALS2CLQ60I27 953 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 RNF135Q8IUD6 432 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 CYP27B1O15528 508 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 CDC27P30260 824 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 SKIV2LQ15477 1246 aaKnown RBP12.14□□□□□ -0.47
TNC-201ENST00000341037 SMIM5Q71RC9 77 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
TNC-201ENST00000341037 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
TNC-201ENST00000341037 MRPL4Q9BYD3 311 aaKnown RBP12.14□□□□□ -0.47
TNC-201ENST00000341037 MAPK13O15264 365 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 TAF11Q15544 211 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 CEP19Q96LK0 163 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 TUBB6Q9BUF5 446 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 DIS3Q9Y2L1 958 aaKnown RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 KRT76Q01546 638 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 CASP8Q14790 479 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 KNOP1Q1ED39 458 aaKnown RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 NUGGCQ68CJ6 796 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 KDELC2Q7Z4H8 507 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 EIF2AK1Q9BQI3 630 aaKnown RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 ELP3Q9H9T3 547 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 KIAA1586Q9HCI6 787 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 CAPN11Q9UMQ6 739 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 L3MBTL1Q9Y468 752 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 SYNGAP1Q96PV0 1343 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 COPS2P61201 443 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 TRPC7Q9HCX4 862 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 LMBRD2Q68DH5 695 aaPredicted RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 GCOM2Q9BZD3 368 aaPredicted RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 SIK2Q9H0K1 926 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 MLXIPLQ9NP71 852 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 PPARGC1AQ9UBK2 798 aaKnown RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 SUN2Q9UH99 717 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 ESRRGP62508 458 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 EPM2AIP1Q7L775 607 aaPredicted RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 UBA6A0AVT1 1052 aaPredicted RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 A8MXQ7 604 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 RASA4BC9J798 803 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 IPO5O00410 1097 aaKnown RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 RASA4O43374 803 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 TDP2O95551 362 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 ATICP31939 592 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 QARSP47897 775 aaKnown RBP12.13□□□□□ -0.47
TNC-201ENST00000341037 GYS2P54840 703 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 PPP1R18Q6NYC8 613 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 OR6J1Q8NGC5 347 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 NDFIP2Q9NV92 336 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 SUFUQ9UMX1 484 aa12.13□□□□□ -0.47
TNC-201ENST00000341037 CFAP69A5D8W1 941 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 P4HBP07237 508 aaKnown RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 MMEP08473 750 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 EEF1DP29692 281 aaKnown RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 EIF3BP55884 814 aaKnown RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 ROR1Q01973 937 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 RAPGEF5Q92565 580 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 C2orf40Q9H1Z8 148 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 PRPF4O43172 522 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNC-201ENST00000341037 KCNA4P22459 653 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 TTC8Q8TAM2 541 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 PBXIP1Q96AQ6 731 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 EGFL8Q99944 293 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 STRIP2Q9ULQ0 834 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 LGALS16A8MUM7 142 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 PODXLO00592 558 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 SDC4P31431 198 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 EN1Q05925 392 aaPredicted RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 DRAP1Q14919 205 aaPredicted RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 PITPNM3Q9BZ71 974 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 TRPV6Q9H1D0 765 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 UPF3AQ9H1J1 476 aaKnown RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 ACAD9Q9H845 621 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 STK36Q9NRP7 1315 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 KRT37O76014 449 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 ZRANB2O95218 330 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNC-201ENST00000341037 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 GRIK1P39086 918 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 MTMR2Q13614 643 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 SPARCL1Q14515 664 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 SYCP2LQ5T4T6 812 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 SYT2Q8N9I0 419 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms