RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 WDR11Q9BZH6 1224 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 GOLGA6AQ9NYA3 693 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 MYPNQ86TC9 1320 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 ARHGEF35A5YM69 484 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 UNCXA6NJT0 531 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 BTNL10A8MVZ5 291 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 CEP104O60308 925 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 HIP1RO75146 1068 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 GUCY2FP51841 1108 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 MKRN3Q13064 507 aaKnown RBP17.73■□□□□ 0.43
LITAF-201ENST00000339430 MOGSQ13724 837 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 CST9Q5W186 159 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 VPS36Q86VN1 386 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 MCF2L2Q86YR7 1114 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 TEX2Q8IWB9 1127 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 SYCP3Q8IZU3 236 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 LRRC57Q8N9N7 239 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 TPCN2Q8NHX9 752 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 LNX1Q8TBB1 728 aaPredicted RBP17.73■□□□□ 0.43
LITAF-201ENST00000339430 SH2D3AQ9BRG2 576 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 GDF3Q9NR23 364 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 FBXL5Q9UKA1 691 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 DNAJC12Q9UKB3 198 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 FRMD4BQ9Y2L6 1034 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 GTPBP10A4D1E9 387 aaKnown RBP17.72■□□□□ 0.43
LITAF-201ENST00000339430 RAD51CO43502 376 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 PEX10O60683 326 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 H2AFZP0C0S5 128 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 STAT1P42224 750 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 HSD17B4P51659 736 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 OAZ1P54368 228 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 SNAPC2Q13487 334 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 LRRC31Q6UY01 552 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 H2AFVQ71UI9 128 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 KCTD17Q8N5Z5 321 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 CASKIN2Q8WXE0 1202 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 RNF146Q9NTX7 359 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 COL20A1Q9P218 1284 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 AGTPBP1Q9UPW5 1226 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 F8VZ95 297 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 TULP1O00294 542 aaPredicted RBP17.72■□□□□ 0.43
LITAF-201ENST00000339430 FERP16591 822 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 ITGB5P18084 799 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 TNFRSF8P28908 595 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 ZNF131P52739 623 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 IRX3P78415 501 aaPredicted RBP17.72■□□□□ 0.43
LITAF-201ENST00000339430 DRAP1Q14919 205 aaPredicted RBP17.72■□□□□ 0.43
LITAF-201ENST00000339430 ARHGAP44Q17R89 818 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 SKIDA1Q1XH10 827 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
LITAF-201ENST00000339430 GLYCTKQ8IVS8 523 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 IL31RAQ8NI17 732 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 FAM76AQ8TAV0 307 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 CAVIN3Q969G5 261 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 AP1M1Q9BXS5 423 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 TEX13BQ9BXU2 312 aa17.72■□□□□ 0.43
LITAF-201ENST00000339430 TISP43B9A030 160 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 HSF2BPO75031 334 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 SOX5P35711 763 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 SETQ01105 290 aaPredicted RBP17.71■□□□□ 0.43
LITAF-201ENST00000339430 IFI16Q16666 785 aaKnown RBP17.71■□□□□ 0.43
LITAF-201ENST00000339430 DAW1Q8N136 415 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 ZIM3Q96PE6 472 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 RUFY1Q96T51 708 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 ASCC2Q9H1I8 757 aaPredicted RBP17.71■□□□□ 0.43
LITAF-201ENST00000339430 PCIF1Q9H4Z3 704 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 CWC15Q9P013 229 aaKnown RBP17.71■□□□□ 0.43
LITAF-201ENST00000339430 SEL1LQ9UBV2 794 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 NENFQ9UMX5 172 aa17.71■□□□□ 0.43
LITAF-201ENST00000339430 K7ENM7 598 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 ATP2A1O14983 1001 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 EXOC3O60645 756 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 GALCP54803 685 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 DNAJC21Q5F1R6 531 aaKnown RBP17.71■□□□□ 0.42
LITAF-201ENST00000339430 NSMFQ6X4W1 530 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 PEX26Q7Z412 305 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 DAAM2Q86T65 1068 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 ARL8AQ96BM9 186 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 CCDC43Q96MW1 224 aaKnown RBP17.71■□□□□ 0.42
LITAF-201ENST00000339430 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.42
LITAF-201ENST00000339430 ABCB4P21439 1286 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 RPS6P62753 249 aaKnown RBP17.7■□□□□ 0.42
LITAF-201ENST00000339430 TNNC1P63316 161 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 MAPK7Q13164 816 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 PADI6Q6TGC4 694 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 STXBP4Q6ZWJ1 553 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 MIER3Q7Z3K6 550 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 METTL13Q8N6R0 699 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 INTS2Q9H0H0 1204 aaKnown RBP17.7■□□□□ 0.42
LITAF-201ENST00000339430 OSGEPQ9NPF4 335 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 KCNH7Q9NS40 1196 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 SEPT11Q9NVA2 429 aaKnown RBP17.7■□□□□ 0.42
LITAF-201ENST00000339430 SAMM50Q9Y512 469 aa17.7■□□□□ 0.42
LITAF-201ENST00000339430 LRRN2O75325 713 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 MYL7Q01449 175 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 PAK2Q13177 524 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 NFIL3Q16649 462 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms