RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 TSC22D4Q9Y3Q8 395 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 PAEPP09466 180 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 ALOX15P16050 662 aaPredicted RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 ADARP55265 1226 aaKnown RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 SEPT6Q14141 434 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 CNPY1Q3B7I2 92 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 HGSNATQ68CP4 663 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 PIGWQ7Z7B1 504 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 CCDC84Q86UT8 332 aaPredicted RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 EPS8L3Q8TE67 593 aaKnown RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 FAM81BQ96LP2 452 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 TTC1Q99614 292 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 NOC2LQ9Y3T9 749 aaKnown RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 GPR75-ASB3A0A0A6YYF3 556 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 MAPK13O15264 365 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 TOM1O60784 492 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 GFPT2O94808 682 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 STARD3NLO95772 234 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 EEF2P13639 858 aaKnown RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 FGFR4P22455 802 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 KLRC1P26715 233 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 CDR2Q01850 454 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 KCNMA1Q12791 1236 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 ITPK1Q13572 414 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 PTF1AQ7RTS3 328 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 TMC3Q7Z5M5 1100 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 CROCCP2Q86T23 111 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.97□□□□□ -0.81
RPGR-202ENST00000339363 BLIDQ8IZY5 108 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 BAP1Q92560 729 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.97□□□□□ -0.81
RPGR-202ENST00000339363 ARHGEF3Q9NR81 526 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 CLIC5Q9NZA1 410 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 ASB3Q9Y575 518 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 TMEM120BA0PK00 339 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 ANKRD62A6NC57 917 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 E7ENQ6 273 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 ATP5HO75947 161 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 RHOBTB3O94955 611 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 TJP3O95049 919 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 ACSL3O95573 720 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 LRRC36Q1X8D7 754 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 HEATR3Q7Z4Q2 680 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 PHLDB2Q86SQ0 1253 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 TRIM50Q86XT4 487 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 RIBC1Q8N443 379 aaPredicted RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 MRRFQ96E11 262 aaKnown RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 ZNF317Q96PQ6 595 aaPredicted RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 MTFR1LQ9H019 292 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 TBC1D7Q9P0N9 293 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 ARPP21Q9UBL0 812 aaPredicted RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 DKC1O60832 514 aaKnown RBP eCLIP9.96□□□□□ -0.81
RPGR-202ENST00000339363 ALADP13716 330 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 CYP11B2P19099 503 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 GALK1P51570 392 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 POLR2FP61218 127 aaKnown RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 KPNB1Q14974 876 aaKnown RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 FAM13CQ8NE31 585 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 CENPTQ96BT3 561 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 NSUN4Q96CB9 384 aaKnown RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 DNAJC1Q96KC8 554 aaKnown RBP9.96□□□□□ -0.81
RPGR-202ENST00000339363 NT5C3AQ9H0P0 336 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 ARHGEF38Q9NXL2 777 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 TMOD4Q9NZQ9 345 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 SH3GLB1Q9Y371 365 aa9.96□□□□□ -0.81
RPGR-202ENST00000339363 POTEMA6NI47 508 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 MYMKA6NI61 221 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 MAFGO15525 162 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 DNAJC6O75061 913 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 NOL4O94818 638 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 UNC5CO95185 931 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 NTSR2O95665 410 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 MARK3P27448 753 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 ATP5DP30049 168 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 CYLC2Q14093 348 aaPredicted RBP9.96□□□□□ -0.82
RPGR-202ENST00000339363 LETM2Q2VYF4 491 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 ERFEQ4G0M1 354 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 AMIGO3Q86WK7 504 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 CATSPER2Q96P56 530 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 ITGB4P16144 1822 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 PASKQ96RG2 1323 aa9.96□□□□□ -0.82
RPGR-202ENST00000339363 ARAP2Q8WZ64 1704 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 PDE5AO76074 875 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 AGTP01019 485 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 FGGP02679 453 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 BRAFP15056 766 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 ECHS1P30084 290 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 ASTE1Q2TB18 679 aaPredicted RBP9.95□□□□□ -0.82
RPGR-202ENST00000339363 ASAP3Q8TDY4 903 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 P2RX5Q93086 422 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 LENG1Q96BZ8 264 aaPredicted RBP9.95□□□□□ -0.82
RPGR-202ENST00000339363 VAT1LQ9HCJ6 419 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 BLOC1S4Q9NUP1 217 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
RPGR-202ENST00000339363 TRIM43BA6NCK2 446 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 SLC37A4O43826 429 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 PEX11AO75192 247 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms