RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 NFRKBQ6P4R8 1299 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 OTUD6AQ7L8S5 288 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 KMT5AQ9NQR1 393 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 DNAJC12Q9UKB3 198 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 LRRC37A2A6NM11 1700 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 UBA1P22314 1058 aaKnown RBP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 CXCR5P32302 372 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 ICAM3P32942 547 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 VAMP7P51809 220 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 DRAP1Q14919 205 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 MTERF2Q49AM1 385 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 INTS8Q75QN2 995 aaKnown RBP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 EEPD1Q7L9B9 569 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 ANKRD13AQ8IZ07 590 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 PROCA1Q8NCQ7 364 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 APEX2Q9UBZ4 518 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 NENFQ9UMX5 172 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 FAM170AA1A519 330 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 EDNRBP24530 442 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 NAB2Q15742 525 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 GLIPR1L2Q4G1C9 344 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 MIS18BP1Q6P0N0 1132 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 TAS1R3Q7RTX0 852 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 NOX5Q96PH1 765 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 TLR10Q9BXR5 811 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 SMARCAL1Q9NZC9 954 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 NAGPAQ9UK23 515 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 USP20Q9Y2K6 914 aa17.69■□□□□ 0.42
SCNN1A-202ENST00000338748 PGK2P07205 417 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 KRT13P13646 458 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 CNGA1P29973 690 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 EPHX2P34913 555 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 CC2D1AQ6P1N0 951 aaPredicted RBP17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 MSANTD4Q8NCY6 345 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 KIFAP3Q92845 792 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 ALS2CR12Q96Q35 445 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 EHD2Q9NZN4 543 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 POTEB2H3BUK9 544 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 DDX3XO00571 662 aaKnown RBP eCLIP17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 DGAT1O75907 488 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 SOX5P35711 763 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 SMTNP53814 917 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 NAP1L1P55209 391 aaKnown RBP17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 Q3C1V9 767 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 CREG2Q8IUH2 290 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 LNX1Q8TBB1 728 aaPredicted RBP17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 UBE2Q2Q8WVN8 375 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 SPIRE2Q8WWL2 714 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 OPTNQ96CV9 577 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 FAM84AQ96KN4 292 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 FGD4Q96M96 766 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 PCYT2Q99447 389 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 NTPCRQ9BSD7 190 aaKnown RBP17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 STK33Q9BYT3 514 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 FBXO40Q9UH90 709 aa17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 BZW2Q9Y6E2 419 aaKnown RBP17.68■□□□□ 0.42
SCNN1A-202ENST00000338748 PALMO75781 387 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 ATG7O95352 703 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 SNRNP35Q16560 246 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 ARHGAP44Q17R89 818 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 ALKBH5Q6P6C2 394 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 TMCO3Q6UWJ1 677 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 ARHGEF19Q8IW93 802 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 L3MBTL3Q96JM7 780 aaPredicted RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 POLR3FQ9H1D9 316 aaPredicted RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 ATP6V0A4Q9HBG4 840 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 FAM53CQ9NYF3 392 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 KCNH4Q9UQ05 1017 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 MAFBQ9Y5Q3 323 aaPredicted RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 CENPFP49454 3210 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 TULP1O00294 542 aaPredicted RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 SASH3O75995 380 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 FARP2O94887 1054 aaPredicted RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 FTCDO95954 541 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 GJA5P36382 358 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 STAT1P42224 750 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 VSNL1P62760 191 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 EPC2Q52LR7 807 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 XKR3Q5GH77 459 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 RNF10Q8N5U6 811 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 TMEM143Q96AN5 459 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 OSBPL9Q96SU4 736 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 POP1Q99575 1024 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 MAF1Q9H063 256 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 TMEM117Q9H0C3 514 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 GOLPH3Q9H4A6 298 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 ZNF302Q9NR11 478 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 TOPORSQ9NS56 1045 aaPredicted RBP17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 RBPJLQ9UBG7 517 aa17.67■□□□□ 0.42
SCNN1A-202ENST00000338748 EMC2Q15006 297 aa17.66■□□□□ 0.42
SCNN1A-202ENST00000338748 MCPH1Q8NEM0 835 aa17.66■□□□□ 0.42
SCNN1A-202ENST00000338748 KAT5Q92993 513 aa17.66■□□□□ 0.42
SCNN1A-202ENST00000338748 ELMO3Q96BJ8 720 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms