RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 RPLP2P05387 115 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 MAPK4P31152 587 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SNAP25P60880 206 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 NCAPH2Q6IBW4 605 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 PPP1R2P3Q6NXS1 205 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 ALKAL1Q6UXT8 129 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 OTUD6AQ7L8S5 288 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SULF1Q8IWU6 871 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 FAM71AQ8IYT1 594 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 AFG1LQ8WV93 481 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SHC3Q92529 594 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 PTPN18Q99952 460 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 C16orf70Q9BSU1 422 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 IGSF5Q9NSI5 407 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 CSADQ9Y600 493 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 TNRC18O15417 2968 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 A6NJR5 290 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 RSPH10B2B2RC85 870 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 TADA3O75528 432 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 C4BPAP04003 597 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 RSPH10BP0C881 870 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 FAM26DQ5JW98 314 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 CCSAPQ6IQ19 270 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 ZNF677Q86XU0 584 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 ATP8B4Q8TF62 1192 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SLC39A2Q9NP94 309 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 PTPRSQ13332 1948 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 TARSL2A2RTX5 802 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SNAI1O95863 264 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 CFBP00751 764 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SERPINC1P01008 464 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 PTPN7P35236 360 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 NPTX2P47972 431 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 FMO5P49326 533 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 FAM193AP78312 1265 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 NAB2Q15742 525 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SLC18A3Q16572 532 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 WDR93Q6P2C0 686 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 ANKRD20A12PQ8NF67 263 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SPATA18Q8TC71 538 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 HELQQ8TDG4 1101 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 ZNF526Q8TF50 670 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 ERO1AQ96HE7 468 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 RPGRIP1Q96KN7 1286 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 SEZ6LQ9BYH1 1024 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 RNF14Q9UBS8 474 aa5.88□□□□□ -1.47
PRPF4B-201ENST00000337659 GREB1Q4ZG55 1949 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 F8VZ95 297 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 ARIH2O95376 493 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 ZNF865P0CJ78 1059 aaPredicted RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 ACO1P21399 889 aaKnown RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 MARCH8Q5T0T0 291 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 ARHGEF16Q5VV41 709 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 IER5Q5VY09 327 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 GPR153Q6NV75 609 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 EFCAB13Q8IY85 973 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 C1orf131Q8NDD1 294 aaKnown RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 EHBP1Q8NDI1 1231 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 CD101Q93033 1021 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 ATP6V0A4Q9HBG4 840 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 GRID2IPA4D2P6 1211 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 CETN3O15182 167 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 EXTL3O43909 919 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 B4GALT4O60513 344 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 CCDC175P0C221 793 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 PSEN1P49768 467 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 EFNA5P52803 228 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 CDC42EP1Q00587 391 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 CYP24A1Q07973 514 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 BMS1Q14692 1282 aaKnown RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 PLCB4Q15147 1175 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 MAP3K21Q5TCX8 1036 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 IQSEC1Q6DN90 963 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 SLC43A3Q8NBI5 491 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 GJA10Q969M2 543 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 CDK5RAP3Q96JB5 506 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 TRIM47Q96LD4 638 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 MPHOSPH6Q99547 160 aaKnown RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 JPH2Q9BR39 696 aaPredicted RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 GBP3Q9H0R5 595 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 TMEM8AQ9HCN3 771 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 LARSQ9P2J5 1176 aaKnown RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 AJAP1Q9UKB5 411 aaPredicted RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 EXOC7Q9UPT5 735 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 MANSC4A6NHS7 340 aaPredicted RBP5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 BTBD19C9JJ37 291 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 NRDCO43847 1150 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 ADCY3O60266 1144 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.471e-16■■□□□ 14
PRPF4B-201ENST00000337659 F2P00734 622 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 EDN1P05305 212 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 GZMAP12544 262 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 GLRA2P23416 452 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 KRT83P78385 493 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 PRKCEQ02156 737 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 KCNH2Q12809 1159 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 NOGQ13253 232 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 CCDC142Q17RM4 750 aa5.87□□□□□ -1.47
PRPF4B-201ENST00000337659 WHAMMP3Q1A5X7 153 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms