RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 LXNQ9BS40 222 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ATP6V0A4Q9HBG4 840 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 KDM4FA0A1W2PPD8 638 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 THOC5Q13769 683 aaKnown RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 ANKRD20A4Q4UJ75 823 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ANKRD20A8PQ5CZ79 823 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ANKRD20A2Q5SQ80 823 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ANKRD20A1Q5TYW2 823 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 BZW1Q7L1Q6 419 aaKnown RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 GIMAP8Q8ND71 665 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.68□□□□□ -0.06
RTN4-202ENST00000337526 ZNF512BQ96KM6 892 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 FAM193BQ96PV7 902 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 ETNK1Q9HBU6 452 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 THEGQ9P2T0 379 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 DCTN4Q9UJW0 460 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 DIP2CQ9Y2E4 1556 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 QRICH2Q9H0J4 1663 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ARHGEF40Q8TER5 1519 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 CALB1P05937 261 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 NKX1-1Q15270 411 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 MAPK6Q16659 721 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 GRAMD1BQ3KR37 738 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 HP1BP3Q5SSJ5 553 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 DPY19L2Q6NUT2 758 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 C4orf50Q6ZRC1 276 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 RAB44Q7Z6P3 723 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 SIX6OS1Q8N1H7 587 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 HIPK4Q8NE63 616 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 NUDCD1Q96RS6 583 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 EPB41L4AQ9HCS5 686 aaPredicted RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 HPS5Q9UPZ3 1129 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 KPNA2P52292 529 aaKnown RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 C1orf54Q8WWF1 131 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 SAAL1Q96ER3 474 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 TRIM56Q9BRZ2 755 aaKnown RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 RGL1Q9NZL6 768 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 HEY1Q9Y5J3 304 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ABCB11O95342 1321 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 SETBP1Q9Y6X0 1596 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 CNGA1P29973 690 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 BYSLQ13895 437 aaKnown RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 ATP6V1E2Q96A05 226 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 TGS1Q96RS0 853 aaKnown RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 TMEM60Q9H2L4 133 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 MEFVO15553 781 aaPredicted RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 NMT1P30419 496 aaKnown RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 ESRRGP62508 458 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 ARMCX2Q7L311 632 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 MYLK4Q86YV6 388 aaPredicted RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 RHOT1Q8IXI2 618 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 RUBCNQ92622 972 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 TRAIPQ9BWF2 469 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 EYA4O95677 639 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 MDH1P40925 334 aaKnown RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 GPS1Q13098 491 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 Q3C1V9 767 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 SPOUT1Q5T280 376 aaKnown RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 ARHGAP27Q6ZUM4 889 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 HAUS6Q7Z4H7 955 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 ARHGEF1Q92888 912 aaKnown RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 SERPINI1Q99574 410 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 RAVER2Q9HCJ3 691 aaKnown RBP14.67□□□□□ -0.06
RTN4-202ENST00000337526 STOML1Q9UBI4 398 aa14.67□□□□□ -0.06
RTN4-202ENST00000337526 MYMKA6NI61 221 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 UCHL3P15374 230 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 FBXL13Q8NEE6 735 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 L2HGDHQ9H9P8 463 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 PCSK1NQ9UHG2 260 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 ZFP69BQ9UJL9 534 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 PSMD14O00487 310 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 WDR46O15213 610 aaKnown RBP14.66□□□□□ -0.06
RTN4-202ENST00000337526 GALCP54803 685 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 KLHL38Q2WGJ6 581 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 SBK1Q52WX2 424 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 KRT80Q6KB66 452 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 OR6B3Q8NGW1 331 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.66□□□□□ -0.06
RTN4-202ENST00000337526 RC3H1Q5TC82 1133 aaKnown RBP14.66□□□□□ -0.06
RTN4-202ENST00000337526 CCT8L2Q96SF2 557 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 AGPAT1Q99943 283 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 MTMR4Q9NYA4 1195 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 ADGRB3O60242 1522 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 TTI1O43156 1089 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 PFDN1O60925 122 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 LMNAP02545 664 aaKnown RBP14.66□□□□□ -0.06
RTN4-202ENST00000337526 ZSCAN20P17040 1043 aaPredicted RBP14.66□□□□□ -0.06
RTN4-202ENST00000337526 REXO1L1PQ8IX06 675 aa14.66□□□□□ -0.06
RTN4-202ENST00000337526 RBM12Q9NTZ6 932 aaKnown RBP14.66□□□□□ -0.06
RTN4-202ENST00000337526 PXDNLA1KZ92 1463 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 GOLGA8CPA6NN73 597 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 KRT14P02533 472 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 GNA15P30679 374 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 ZNF699Q32M78 642 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 CEP55Q53EZ4 464 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 KIAA1755Q5JYT7 1200 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 PPM1NQ8N819 430 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms