RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TRADDQ15628 312 aa25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 APOBEC3FQ8IUX4 373 aaKnown RBP25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 INPP4AQ96PE3 977 aaPredicted RBP25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 TEX13BQ9BXU2 312 aa25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 APEX2Q9UBZ4 518 aa25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 SOX5P35711 763 aa25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 VAMP7P51809 220 aa25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 LMBRD2Q68DH5 695 aaPredicted RBP25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 KCTD17Q8N5Z5 321 aa25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 NSUN6Q8TEA1 469 aaKnown RBP25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 ACCSQ96QU6 501 aa25.13■■□□□ 1.61
CLPTM1-201ENST00000337392 MTERF2Q49AM1 385 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 TMEM161BQ8NDZ6 487 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 CLMNQ96JQ2 1002 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 TMOD4Q9NZQ9 345 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 WDR81Q562E7 1941 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 STAT1P42224 750 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 KRT76Q01546 638 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 SLC39A4Q6P5W5 647 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 HNRNPLLQ8WVV9 542 aaKnown RBP25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 MKNK1Q9BUB5 465 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 UBXN6Q9BZV1 441 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 PCDHGC5Q9Y5F6 944 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 SNCAIPQ9Y6H5 919 aa25.12■■□□□ 1.61
CLPTM1-201ENST00000337392 LTBP3Q9NS15 1303 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 GALCP54803 685 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 ACTR2P61160 394 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 RNF10Q8N5U6 811 aaKnown RBP25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 JPH1Q9HDC5 661 aaPredicted RBP25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 BTBD7Q9P203 1132 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 ERICH4A6NGS2 130 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 POTEB2H3BUK9 544 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 KCNK3O14649 394 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 STBD1O95210 358 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 PRKCIP41743 596 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 GTF2BQ00403 316 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 MEI1Q5TIA1 1274 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 TAF3Q5VWG9 929 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 WDR93Q6P2C0 686 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 ZNF771Q7L3S4 317 aaPredicted RBP25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 XXYLT1Q8NBI6 393 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 PAGR1Q9BTK6 254 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 ACAD9Q9H845 621 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 XPNPEP1Q9NQW7 623 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 ADAMTS5Q9UNA0 930 aa25.11■■□□□ 1.61
CLPTM1-201ENST00000337392 ERLIN1O75477 346 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 KRT13P13646 458 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 TCP1P17987 556 aaKnown RBP25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 JAK3P52333 1124 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 PRKCEQ02156 737 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 TEX2Q8IWB9 1127 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 SEMA4DQ92854 862 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 ARHGEF26Q96DR7 871 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 TBX20Q9UMR3 447 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 GTPBP10A4D1E9 387 aaKnown RBP25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 CNGA1P29973 690 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 FAM193AP78312 1265 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 HDXQ7Z353 690 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 ANKRD35Q8N283 1001 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 TMEM143Q96AN5 459 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 STK33Q9BYT3 514 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 TMEM117Q9H0C3 514 aa25.1■■□□□ 1.61
CLPTM1-201ENST00000337392 LYPLA2O95372 231 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 NFIL3Q16649 462 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 KMT5AQ9NQR1 393 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 UBE4BO95155 1302 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 DLATP10515 647 aaKnown RBP25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 SNRNP35Q16560 246 aaKnown RBP25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 CCDC102AQ96A19 550 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 PI4K2AQ9BTU6 479 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 TMEM206Q9H813 350 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 SLC9A2Q9UBY0 812 aa25.09■■□□□ 1.61
CLPTM1-201ENST00000337392 NCKAP1LP55160 1127 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 DMP1Q13316 513 aaPredicted RBP25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 OTUD5Q96G74 571 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 ELP3Q9H9T3 547 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 ATP4AP20648 1035 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 WNT7BP56706 349 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 GADL1Q6ZQY3 521 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 SLC9A9Q8IVB4 645 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 AP1M1Q9BXS5 423 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 THAP2Q9H0W7 228 aa25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 LUC7LQ9NQ29 371 aaKnown RBP25.08■■□□□ 1.61
CLPTM1-201ENST00000337392 IRF6O14896 467 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 ATMINO43313 823 aaPredicted RBP25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 PPP2R5AQ15172 486 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 KLHL7Q8IXQ5 586 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 PPM1KQ8N3J5 372 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 DHX38Q92620 1227 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 C12orf42Q96LP6 360 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 NENFQ9UMX5 172 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 LCTP09848 1927 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 GLI1P08151 1106 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 H2AFZP0C0S5 128 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 SFNP31947 248 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 SCARA3Q6AZY7 606 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 H2AFVQ71UI9 128 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 TAS1R3Q7RTX0 852 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 GPC2Q8N158 579 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms