RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 CCDC70Q6NSX1 233 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 ARMC9Q7Z3E5 817 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 ANKRD13AQ8IZ07 590 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 CEP112Q8N8E3 955 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.8□□□□□ -0.84
COPB2-201ENST00000333188 SLC20A1Q8WUM9 679 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 BTBD6Q96KE9 485 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 MMP19Q99542 508 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 INTS2Q9H0H0 1204 aaKnown RBP9.8□□□□□ -0.84
COPB2-201ENST00000333188 RRAGCQ9HB90 399 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 OSGEPQ9NPF4 335 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
COPB2-201ENST00000333188 USTQ9Y2C2 406 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 AFG3L2Q9Y4W6 797 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 UBIAD1Q9Y5Z9 338 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 CTIFO43310 598 aaKnown RBP9.8□□□□□ -0.84
COPB2-201ENST00000333188 CELF2O95319 508 aaKnown RBP9.8□□□□□ -0.84
COPB2-201ENST00000333188 SERPING1P05155 500 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 BFSP1Q12934 665 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 MESDQ14696 234 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 CTNNBL1Q8WYA6 563 aaPredicted RBP9.8□□□□□ -0.84
COPB2-201ENST00000333188 BAP1Q92560 729 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 PNKPQ96T60 521 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
COPB2-201ENST00000333188 PGAP2Q9UHJ9 254 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 EFCAB8A8MWE9 144 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 SF3A3Q12874 501 aaKnown RBP eCLIP9.8□□□□□ -0.84
COPB2-201ENST00000333188 PEX26Q7Z412 305 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
COPB2-201ENST00000333188 TAS2R14Q9NYV8 317 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 FAM184BQ9ULE4 1060 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 AKT3Q9Y243 479 aa9.8□□□□□ -0.84
COPB2-201ENST00000333188 MYH15Q9Y2K3 1946 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 CDK5RAP2Q96SN8 1893 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 EIF3CLB5ME19 914 aaKnown RBP9.79□□□□□ -0.84
COPB2-201ENST00000333188 ZNF286BP0CG31 522 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 FGFR4P22455 802 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 JAK3P52333 1124 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 VSNL1P62760 191 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 ZBTB41Q5SVQ8 909 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 PALB2Q86YC2 1186 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 TAB3Q8N5C8 712 aaPredicted RBP9.79□□□□□ -0.84
COPB2-201ENST00000333188 TAS1R2Q8TE23 839 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 LENG1Q96BZ8 264 aaPredicted RBP9.79□□□□□ -0.84
COPB2-201ENST00000333188 MBOAT7Q96N66 472 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 MAP7D2Q96T17 732 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 EIF3CQ99613 913 aaKnown RBP9.79□□□□□ -0.84
COPB2-201ENST00000333188 ABCB6Q9NP58 842 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 CYP26B1Q9NR63 512 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 FBXO40Q9UH90 709 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 CPA4Q9UI42 421 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 CCL15-CCL14A0A0B4J2E2 113 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 PDE2AO00408 941 aaPredicted RBP9.79□□□□□ -0.84
COPB2-201ENST00000333188 PIK3R2O00459 728 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 H2AFZP0C0S5 128 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 UBA1P22314 1058 aaKnown RBP9.79□□□□□ -0.84
COPB2-201ENST00000333188 IRX5P78411 483 aaPredicted RBP9.79□□□□□ -0.84
COPB2-201ENST00000333188 SEMA3FQ13275 785 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 EMC2Q15006 297 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 CCL15Q16663 113 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 EDRF1Q3B7T1 1238 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 HYIQ5T013 277 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 FAM182AQ5T1J6 154 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 LLGL2Q6P1M3 1020 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 H2AFVQ71UI9 128 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 FRMD5Q7Z6J6 570 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 ARHGEF19Q8IW93 802 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 CCDC170Q8IYT3 715 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 EHBP1Q8NDI1 1231 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 HDAC7Q8WUI4 952 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 TATDN2Q93075 761 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 ATP6V0A4Q9HBG4 840 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 TBX20Q9UMR3 447 aa9.79□□□□□ -0.84
COPB2-201ENST00000333188 ZSCAN5CA6NGD5 496 aaPredicted RBP9.78□□□□□ -0.84
COPB2-201ENST00000333188 ADRB2P07550 413 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 ZSCAN20P17040 1043 aaPredicted RBP9.78□□□□□ -0.84
COPB2-201ENST00000333188 MMP14P50281 582 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 DAB2IPQ5VWQ8 1189 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 ERO1BQ86YB8 467 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 TRIM58Q8NG06 486 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 KRT12Q99456 494 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 MSTO1Q9BUK6 570 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 VPS33BQ9H267 617 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 L2HGDHQ9H9P8 463 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 CD19P15391 556 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 ALDH5A1P51649 535 aaPredicted RBP9.78□□□□□ -0.84
COPB2-201ENST00000333188 MAPK7Q13164 816 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 PRPF31Q8WWY3 499 aaKnown RBP9.78□□□□□ -0.84
COPB2-201ENST00000333188 TTYH3Q9C0H2 523 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 LAMB1P07942 1786 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 ARIH2O95376 493 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 GTF2F1P35269 517 aaKnown RBP eCLIP9.78□□□□□ -0.84
COPB2-201ENST00000333188 VPS41P49754 854 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 RPS6KA1Q15418 735 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 HSP90B2PQ58FF3 399 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 SESTD1Q86VW0 696 aa9.78□□□□□ -0.84
COPB2-201ENST00000333188 RPUSD2Q8IZ73 545 aaKnown RBP9.78□□□□□ -0.84
COPB2-201ENST00000333188 UHMK1Q8TAS1 419 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms