RNA–Protein interactions for RNA: ENST00000331587.8

CALCA-201, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-201ENST00000331587 GPM6BQ13491 265 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 PKP1Q13835 747 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 ZRSR1Q15695 479 aaKnown RBP16.32■□□□□ 0.2
CALCA-201ENST00000331587 FOXD4L5Q5VV16 416 aaPredicted RBP16.32■□□□□ 0.2
CALCA-201ENST00000331587 USP49Q70CQ1 688 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 SRGAP1Q7Z6B7 1085 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
CALCA-201ENST00000331587 IFNLR1Q8IU57 520 aaPredicted RBP16.32■□□□□ 0.2
CALCA-201ENST00000331587 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 EXOC8Q8IYI6 725 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 DAW1Q8N136 415 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 SLC17A8Q8NDX2 589 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 HELQQ8TDG4 1101 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 FOXD4L4Q8WXT5 416 aaPredicted RBP16.32■□□□□ 0.2
CALCA-201ENST00000331587 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
CALCA-201ENST00000331587 ELAC1Q9H777 363 aaKnown RBP16.32■□□□□ 0.2
CALCA-201ENST00000331587 TYW1Q9NV66 732 aaKnown RBP16.32■□□□□ 0.2
CALCA-201ENST00000331587 ASAP2O43150 1006 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 B4GALT3O60512 393 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 EYA4O95677 639 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 MUTP22033 750 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 PBX3P40426 434 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 AFF1P51825 1210 aaKnown RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 CEBPZQ03701 1054 aaKnown RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 CAMK1Q14012 370 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 MXD4Q14582 209 aaPredicted RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 TMEM119Q4V9L6 283 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 HYIQ5T013 277 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 KRT79Q5XKE5 535 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 ARL6IP4Q66PJ3 421 aaKnown RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 TWF2Q6IBS0 349 aaKnown RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
CALCA-201ENST00000331587 USP28Q96RU2 1077 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 EIF2AQ9BY44 585 aaKnown RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 ALG13Q9NP73 1137 aaKnown RBP16.31■□□□□ 0.2
CALCA-201ENST00000331587 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 FAM105AQ9NUU6 356 aa16.31■□□□□ 0.2
CALCA-201ENST00000331587 LRRIQ4A6NIV6 560 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 INO80B-WBP1J3KQ70 363 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 ITGB1P05556 798 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 MAPK7Q13164 816 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 KLHL23Q8NBE8 558 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 SMG8Q8ND04 991 aaKnown RBP16.3■□□□□ 0.2
CALCA-201ENST00000331587 MCPH1Q8NEM0 835 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 SAMD11Q96NU1 681 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 INO80BQ9C086 356 aaPredicted RBP16.3■□□□□ 0.2
CALCA-201ENST00000331587 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
CALCA-201ENST00000331587 PCDHGC5Q9Y5F6 944 aa16.3■□□□□ 0.2
CALCA-201ENST00000331587 NPHP3-ACAD11A0A0J9YXS1 232 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
CALCA-201ENST00000331587 ARF4P18085 180 aaPredicted RBP16.29■□□□□ 0.2
CALCA-201ENST00000331587 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 RAD51AP2Q09MP3 1159 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 CDCA2Q69YH5 1023 aaPredicted RBP16.29■□□□□ 0.2
CALCA-201ENST00000331587 RINT1Q6NUQ1 792 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 AGMOQ6ZNB7 445 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 C1orf186Q6ZWK4 172 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 CABP7Q86V35 215 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 TRAIPQ9BWF2 469 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 TMEM117Q9H0C3 514 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 PLAGL2Q9UPG8 496 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 HES2Q9Y543 173 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 PCDHB2Q9Y5E7 798 aa16.29■□□□□ 0.2
CALCA-201ENST00000331587 HIP1RO75146 1068 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 IRS1P35568 1242 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 TFF2Q03403 129 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 TFDP1Q14186 410 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 KARSQ15046 597 aaKnown RBP16.28■□□□□ 0.2
CALCA-201ENST00000331587 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 SPPL3Q8TCT6 385 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 MRPL38Q96DV4 380 aaKnown RBP16.28■□□□□ 0.2
CALCA-201ENST00000331587 EPSTI1Q96J88 318 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 NFKBIZQ9BYH8 718 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 BLOC1S4Q9NUP1 217 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 DACT1Q9NYF0 836 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 DNM3Q9UQ16 869 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 VCANP13611 3396 aa16.28■□□□□ 0.2
CALCA-201ENST00000331587 SFI1A8K8P3 1242 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 ZNF623O75123 536 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 OFD1O75665 1012 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 ERLIN2O94905 339 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 EOMESO95936 686 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 SLC12A3P55017 1021 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
CALCA-201ENST00000331587 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.2
CALCA-201ENST00000331587 ARSHQ5FYA8 562 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.2
CALCA-201ENST00000331587 FAM43BQ6ZT52 329 aaPredicted RBP16.27■□□□□ 0.2
CALCA-201ENST00000331587 TAS1R3Q7RTX0 852 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 MRPL10Q7Z7H8 261 aaKnown RBP16.27■□□□□ 0.2
CALCA-201ENST00000331587 CHAMP1Q96JM3 812 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 CXCL16Q9H2A7 254 aa16.27■□□□□ 0.2
CALCA-201ENST00000331587 NXF3Q9H4D5 531 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms