RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 FAM205CA6NFA0 338 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 SLITRK3O94933 977 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 ALDH7A1P49419 539 aaKnown RBP20.22■□□□□ 0.83
RAB28-202ENST00000330852 GLB1LQ6UWU2 654 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 KSR1Q8IVT5 923 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 PGBD4Q96DM1 585 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 ANKEF1Q9NU02 776 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 AGPAT5Q9NUQ2 364 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 DCXO43602 365 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 GLP2RO95838 553 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 LAMTOR4Q0VGL1 99 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 MXD4Q14582 209 aaPredicted RBP20.22■□□□□ 0.83
RAB28-202ENST00000330852 SAFBQ15424 915 aaKnown RBP eCLIP20.22■□□□□ 0.83
RAB28-202ENST00000330852 TPH2Q8IWU9 490 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 SLC39A11Q8N1S5 342 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 ZNF579Q8NAF0 562 aaKnown RBP20.22■□□□□ 0.83
RAB28-202ENST00000330852 HSD17B14Q9BPX1 270 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 TCF25Q9BQ70 676 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 EIF2AK1Q9BQI3 630 aaKnown RBP20.22■□□□□ 0.83
RAB28-202ENST00000330852 LLPHQ9BRT6 129 aaKnown RBP20.22■□□□□ 0.83
RAB28-202ENST00000330852 TTC12Q9H892 705 aaPredicted RBP20.22■□□□□ 0.83
RAB28-202ENST00000330852 ENTPD7Q9NQZ7 604 aa20.22■□□□□ 0.83
RAB28-202ENST00000330852 NEMFO60524 1076 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 DTNBO60941 627 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 XRCC6P12956 609 aaKnown RBP eCLIP20.21■□□□□ 0.83
RAB28-202ENST00000330852 POU5F1BQ06416 359 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 EMC2Q15006 297 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 FERMT3Q86UX7 667 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 MTRQ99707 1265 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 C11orf16Q9NQ32 467 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 PCDHGC5Q9Y5F6 944 aa20.21■□□□□ 0.83
RAB28-202ENST00000330852 PRR33A8MZF0 331 aa20.2■□□□□ 0.82
RAB28-202ENST00000330852 JAK2O60674 1132 aa20.2■□□□□ 0.82
RAB28-202ENST00000330852 CYP4A11Q02928 519 aa20.2■□□□□ 0.82
RAB28-202ENST00000330852 CTTNQ14247 550 aaKnown RBP20.2■□□□□ 0.82
RAB28-202ENST00000330852 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
RAB28-202ENST00000330852 TMEM143Q96AN5 459 aa20.2■□□□□ 0.82
RAB28-202ENST00000330852 MTMR9Q96QG7 549 aa20.2■□□□□ 0.82
RAB28-202ENST00000330852 PER2O15055 1255 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 SRGAP2CP0DJJ0 459 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 BCAR1P56945 870 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 ORC2Q13416 577 aaPredicted RBP20.19■□□□□ 0.82
RAB28-202ENST00000330852 KCNC3Q14003 757 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 SMC1AQ14683 1233 aaKnown RBP20.19■□□□□ 0.82
RAB28-202ENST00000330852 NOMO2Q5JPE7 1267 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 PLPP4Q5VZY2 271 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 MRPL10Q7Z7H8 261 aaKnown RBP20.19■□□□□ 0.82
RAB28-202ENST00000330852 CNNM3Q8NE01 707 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 TMEM169Q96HH4 297 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 STK39Q9UEW8 545 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 BARX2Q9UMQ3 279 aaPredicted RBP20.19■□□□□ 0.82
RAB28-202ENST00000330852 HCN4Q9Y3Q4 1203 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 PCDHB2Q9Y5E7 798 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 DGAT1O75907 488 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 SEC24BO95487 1268 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 HOXB8P17481 243 aaPredicted RBP20.19■□□□□ 0.82
RAB28-202ENST00000330852 AXLP30530 894 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 TFDP1Q14186 410 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 MRPL43Q8N983 215 aaKnown RBP20.19■□□□□ 0.82
RAB28-202ENST00000330852 RNF149Q8NC42 400 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 ZSCAN31Q96LW9 406 aaPredicted RBP20.19■□□□□ 0.82
RAB28-202ENST00000330852 KANSL3Q9P2N6 904 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 CNTNAP2Q9UHC6 1331 aa20.19■□□□□ 0.82
RAB28-202ENST00000330852 OFD1O75665 1012 aa20.18■□□□□ 0.82
RAB28-202ENST00000330852 TXKP42681 527 aa20.18■□□□□ 0.82
RAB28-202ENST00000330852 NCBP1Q09161 790 aaKnown RBP20.18■□□□□ 0.82
RAB28-202ENST00000330852 GIT2Q14161 759 aa20.18■□□□□ 0.82
RAB28-202ENST00000330852 IFNLR1Q8IU57 520 aaPredicted RBP20.18■□□□□ 0.82
RAB28-202ENST00000330852 CCDC51Q96ER9 411 aa20.18■□□□□ 0.82
RAB28-202ENST00000330852 USP15Q9Y4E8 981 aaPredicted RBP20.18■□□□□ 0.82
RAB28-202ENST00000330852 HOXA11P31270 313 aaPredicted RBP20.17■□□□□ 0.82
RAB28-202ENST00000330852 PBX3P40426 434 aa20.17■□□□□ 0.82
RAB28-202ENST00000330852 PTENP60484 403 aa20.17■□□□□ 0.82
RAB28-202ENST00000330852 HMGN5P82970 282 aaKnown RBP20.17■□□□□ 0.82
RAB28-202ENST00000330852 RNASELQ05823 741 aaKnown RBP20.17■□□□□ 0.82
RAB28-202ENST00000330852 URGCPQ8TCY9 931 aa20.17■□□□□ 0.82
RAB28-202ENST00000330852 CCDC43Q96MW1 224 aaKnown RBP20.17■□□□□ 0.82
RAB28-202ENST00000330852 PHF7Q9BWX1 381 aaPredicted RBP20.17■□□□□ 0.82
RAB28-202ENST00000330852 MINDY3Q9H8M7 445 aa20.17■□□□□ 0.82
RAB28-202ENST00000330852 UBN1Q9NPG3 1134 aa20.17■□□□□ 0.82
RAB28-202ENST00000330852 TBC1D13Q9NVG8 400 aa20.17■□□□□ 0.82
RAB28-202ENST00000330852 ZBTB39O15060 712 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 ERLIN2O94905 339 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 HERC4Q5GLZ8 1057 aaPredicted RBP20.16■□□□□ 0.82
RAB28-202ENST00000330852 VN1R2Q8NFZ6 395 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 SUSD6Q92537 303 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 CASP10Q92851 521 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 LPPQ93052 612 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 C8orf76Q96K31 380 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 NFKBIZQ9BYH8 718 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 FOXP1Q9H334 677 aaPredicted RBP20.16■□□□□ 0.82
RAB28-202ENST00000330852 NRDE2Q9H7Z3 1164 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 XPNPEP1Q9NQW7 623 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 SH2B1Q9NRF2 756 aaPredicted RBP20.16■□□□□ 0.82
RAB28-202ENST00000330852 IRAK3Q9Y616 596 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 C5orf42Q9H799 3197 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 HIDE1A8MVS5 230 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 LOC730098B7Z3J9 87 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms