RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TMEM63BQ5T3F8 832 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 CCDC62Q6P9F0 684 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 ANKRD7Q92527 254 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 TMEM143Q96AN5 459 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.5■□□□□ 0.55
DDX41-201ENST00000330503 V9GYY5 206 aaPredicted RBP18.5■□□□□ 0.55
DDX41-201ENST00000330503 RBAK-RBAKDNI3L0D1 243 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 KRT13P13646 458 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 POLGP54098 1239 aaPredicted RBP18.49■□□□□ 0.55
DDX41-201ENST00000330503 ARID5AQ03989 594 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 GFPT1Q06210 699 aaPredicted RBP18.49■□□□□ 0.55
DDX41-201ENST00000330503 ASIC2Q16515 512 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 KCNV1Q6PIU1 500 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 INTS8Q75QN2 995 aaKnown RBP18.49■□□□□ 0.55
DDX41-201ENST00000330503 FBXO16Q8IX29 292 aaPredicted RBP18.49■□□□□ 0.55
DDX41-201ENST00000330503 GPR20Q99678 358 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 CARD6Q9BX69 1037 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 NRBP2Q9NSY0 501 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 ARHGAP28Q9P2N2 729 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 MYO6Q9UM54 1294 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 CTAGE9A4FU28 777 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 GOLGA8IPA6NC78 632 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 GOLGA8JA6NMD2 632 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 KRT86O43790 486 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 ADRB2P07550 413 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 ARL2P36404 184 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 MAGEA1P43355 309 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 VAMP7P51809 220 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 PPP3CAQ08209 521 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 TDRD12Q587J7 1177 aaKnown RBP18.49■□□□□ 0.55
DDX41-201ENST00000330503 FAM160B1Q5W0V3 765 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 ANKRD13CQ8N6S4 541 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 LMO3Q8TAP4 145 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 ASAP3Q8TDY4 903 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 IFT74Q96LB3 600 aa18.49■□□□□ 0.55
DDX41-201ENST00000330503 IFIH1Q9BYX4 1025 aaKnown RBP18.49■□□□□ 0.55
DDX41-201ENST00000330503 INTS2Q9H0H0 1204 aaKnown RBP18.49■□□□□ 0.55
DDX41-201ENST00000330503 MCM3APO60318 1980 aa18.48■□□□□ 0.55
DDX41-201ENST00000330503 KLHL30Q0D2K2 578 aa18.48■□□□□ 0.55
DDX41-201ENST00000330503 HSDL1Q3SXM5 330 aa18.48■□□□□ 0.55
DDX41-201ENST00000330503 ANKRD23Q86SG2 305 aa18.48■□□□□ 0.55
DDX41-201ENST00000330503 NAPGQ99747 312 aaPredicted RBP18.48■□□□□ 0.55
DDX41-201ENST00000330503 PDGFCQ9NRA1 345 aa18.48■□□□□ 0.55
DDX41-201ENST00000330503 EMSYQ7Z589 1322 aa18.48■□□□□ 0.55
DDX41-201ENST00000330503 LOC102724159A0A0B4J2E5 919 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 LGR5O75473 907 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
DDX41-201ENST00000330503 GLRA2P23416 452 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 MYL7Q01449 175 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 KIF5AQ12840 1032 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 PWP2Q15269 919 aaKnown RBP18.47■□□□□ 0.55
DDX41-201ENST00000330503 ZNF792Q3KQV3 632 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 SPRYD7Q5W111 196 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 CBWD2Q8IUF1 395 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 COPS5Q92905 334 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 SPAG5Q96R06 1193 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 PJA2O43164 708 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 ENOX2Q16206 610 aaKnown RBP18.47■□□□□ 0.55
DDX41-201ENST00000330503 C2orf69Q8N8R5 385 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 KCNN1Q92952 543 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 SAAL1Q96ER3 474 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 PTPN18Q99952 460 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 MORF4L1Q9UBU8 362 aa18.47■□□□□ 0.55
DDX41-201ENST00000330503 ASB14A6NK59 587 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 CCNA1P78396 465 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 ZNF571Q7Z3V5 609 aaPredicted RBP18.46■□□□□ 0.55
DDX41-201ENST00000330503 FBXL18Q96ME1 805 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 CDC23Q9UJX2 597 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 A0A087X0T9 212 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 FAM228BP0C875 321 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 RFC5P40937 340 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 PRKCIP41743 596 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 GCLMP48507 274 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 PTK2Q05397 1052 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 SNRNP35Q16560 246 aaKnown RBP18.46■□□□□ 0.55
DDX41-201ENST00000330503 SLC18A3Q16572 532 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 BRDTQ58F21 947 aaPredicted RBP18.46■□□□□ 0.55
DDX41-201ENST00000330503 DHX37Q8IY37 1157 aaKnown RBP18.46■□□□□ 0.55
DDX41-201ENST00000330503 STK33Q9BYT3 514 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 TSGA10Q9BZW7 698 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 KCNG1Q9UIX4 513 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 DNAJC12Q9UKB3 198 aa18.46■□□□□ 0.55
DDX41-201ENST00000330503 LRRN2O75325 713 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 MAFO75444 373 aaPredicted RBP18.45■□□□□ 0.54
DDX41-201ENST00000330503 TADA3O75528 432 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 PNMA6AP0CW24 399 aaPredicted RBP18.45■□□□□ 0.54
DDX41-201ENST00000330503 ADORA2AP29274 412 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 GCLCP48506 637 aaPredicted RBP18.45■□□□□ 0.54
DDX41-201ENST00000330503 AMPD2Q01433 879 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 ERCC6LQ2NKX8 1250 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 PHLDB3Q6NSJ2 640 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 ARMCX2Q7L311 632 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 TRIM50Q86XT4 487 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 SLC7A3Q8WY07 619 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 MFSD14AQ96MC6 490 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 GPR88Q9GZN0 384 aa18.45■□□□□ 0.54
DDX41-201ENST00000330503 USP20Q9Y2K6 914 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms