RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MAD2L2Q9UI95 211 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 GREB1Q4ZG55 1949 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 WDFY3Q8IZQ1 3526 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 HELZ2Q9BYK8 2649 aaKnown RBP16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 NBEAQ8NFP9 2946 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 GLUD1P00367 558 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 VTNP04004 478 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 NT5C2P49902 561 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 PPP2R5DQ14738 602 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 TPRG1Q6ZUI0 275 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 RSPH1Q8WYR4 309 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 ADAM33Q9BZ11 813 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
CTHRC1-201ENST00000330295 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 PALM3A6NDB9 673 aaPredicted RBP16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 HBP1O60381 514 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 ADH1AP07327 375 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 NCLP19338 710 aaKnown RBP16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 SLC26A2P50443 739 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 ZCCHC14Q8WYQ9 949 aaKnown RBP16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 LSM14BQ9BX40 385 aaKnown RBP16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 TBC1D13Q9NVG8 400 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 COL1A2P08123 1366 aa16.84■□□□□ 0.29
CTHRC1-201ENST00000330295 C2CD2LO14523 706 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 MX1P20591 662 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 SLC11A1P49279 550 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 AK2P54819 239 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 ACTR2P61160 394 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 ADCY1Q08828 1119 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 STPG1Q5TH74 334 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 PSAPL1Q6NUJ1 521 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF852Q6ZMS4 543 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 MAMSTRQ6ZN01 415 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 MTSS1LQ765P7 747 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 C12orf50Q8NA57 414 aaPredicted RBP16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 HDAC7Q8WUI4 952 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 GATA6Q92908 595 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 CUL5Q93034 780 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 WASF3Q9UPY6 502 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 MRPS17Q9Y2R5 130 aaKnown RBP16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 UBIAD1Q9Y5Z9 338 aa16.83■□□□□ 0.28
CTHRC1-201ENST00000330295 DOCK6Q96HP0 2047 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 MTCL1Q9Y4B5 1905 aaKnown RBP16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 TEX28O15482 410 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 MAFGO15525 162 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 HRO43593 1189 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 URODP06132 367 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 SPINK2P20155 84 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 FSHRP23945 695 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 RNASELQ05823 741 aaKnown RBP16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 FOXC1Q12948 553 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 SF3A2Q15428 464 aaKnown RBP16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 SOWAHCQ53LP3 525 aaPredicted RBP16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 RPS6KC1Q96S38 1066 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 PRKD2Q9BZL6 878 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 GBP3Q9H0R5 595 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 CHRDQ9H2X0 955 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 RXFP3Q9NSD7 469 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 ZDHHC7Q9NXF8 308 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 DACT1Q9NYF0 836 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 CDH7Q9ULB5 785 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 NAV2Q8IVL1 2488 aa16.82■□□□□ 0.28
CTHRC1-201ENST00000330295 ZBTB42B2RXF5 422 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 B4E1Z4 1266 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 PIK3CDO00329 1044 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 MEIS2O14770 477 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 CYTH3O43739 400 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 C22orf31O95567 290 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 SPATA31D3P0C874 917 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF484Q5JVG2 852 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 SPATA31D4Q6ZUB0 917 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 METTL13Q8N6R0 699 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 KIF12Q96FN5 646 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 IER2Q9BTL4 223 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 ZSWIM5Q9P217 1185 aa16.81■□□□□ 0.28
CTHRC1-201ENST00000330295 F5P12259 2224 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 SDK1Q7Z5N4 2213 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 A0A0D9SFI3 127 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 B4GALT3O60512 393 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 EIF4BP23588 611 aaKnown RBP16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 CNR2P34972 360 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 CCR3P51677 355 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 NLRP11P59045 1033 aaKnown RBP16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 SRSF5Q13243 272 aaKnown RBP16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 NOMO2Q5JPE7 1267 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 IFIT1BQ5T764 474 aaKnown RBP16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 GLB1LQ6UWU2 654 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 PIP4P2Q8N4L2 257 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 FAM160A2Q8N612 972 aaPredicted RBP16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 JADE2Q9NQC1 790 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 SSX2IPQ9Y2D8 614 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms