RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 ESR2Q92731 530 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 SELENOSQ9BQE4 189 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 EIF2AQ9BY44 585 aaKnown RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 IFIH1Q9BYX4 1025 aaKnown RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 STMN4Q9H169 189 aaPredicted RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 DPH5Q9H2P9 285 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 CPVLQ9H3G5 476 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 CABP5Q9NP86 173 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 INIPQ9NRY2 104 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 SMARCAL1Q9NZC9 954 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 PNMA2Q9UL42 364 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 CCDC88AQ3V6T2 1871 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 IRS2Q9Y4H2 1338 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 SMIM31A0A1B0GVY4 71 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DCDC2CA8MYV0 355 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 LGR5O75473 907 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 UFL1O94874 794 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 AGTP01019 485 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 NUDT17P0C025 328 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 GYS1P13807 737 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 EEF1GP26641 437 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 RGS2P41220 211 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DNM2P50570 870 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 MKRN3Q13064 507 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 BCL2A1Q16548 175 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 SYDE2Q5VT97 1194 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 C3orf62Q6ZUJ4 267 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 NANOGNBQ7Z5D8 188 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 SPATA24Q86W54 205 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 NOSTRINQ8IVI9 506 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 MAP7D3Q8IWC1 876 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 STAG2Q8N3U4 1231 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 PPFIBP2Q8ND30 876 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 FAM13CQ8NE31 585 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 TGFBRAP1Q8WUH2 860 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 MXD3Q9BW11 206 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 ADAM7Q9H2U9 754 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 MLXIPQ9HAP2 919 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 ETNK1Q9HBU6 452 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 ETNK2Q9NVF9 386 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DDX43Q9NXZ2 648 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 TMEM59LQ9UK28 342 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 R3HDM2Q9Y2K5 976 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DUSP10Q9Y6W6 482 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 TIAM2Q8IVF5 1701 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 TBC1D12O60347 775 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 AFPP02771 609 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 SHBGP04278 402 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 SERPINB2P05120 415 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 PDGFRBP09619 1106 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 VAV1P15498 845 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 TRIM21P19474 475 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 HNRNPH3P31942 346 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 ADARP55265 1226 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DPYDQ12882 1025 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 GRAPQ13588 217 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 R3HDM1Q15032 1099 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 INAQ16352 499 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 KLHDC7AQ5VTJ3 777 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 GRAMD4Q6IC98 578 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DUS1LQ6P1R4 473 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 RSPH3Q86UC2 560 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 COL23A1Q86Y22 540 aaPredicted RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 ALDH16A1Q8IZ83 802 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 ST13P4Q8IZP2 240 aaPredicted RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 PROM2Q8N271 834 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 SRBD1Q8N5C6 995 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 GRAPLQ8TC17 118 aaPredicted RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 ZNF507Q8TCN5 953 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DQX1Q8TE96 717 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 CCDC42Q96M95 316 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 INPP4AQ96PE3 977 aaPredicted RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 NOX5Q96PH1 765 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 RNF41Q9H4P4 317 aaPredicted RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 PRKAG3Q9UGI9 489 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 PCDHA13Q9Y5I0 950 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.05□□□□□ -1.12
TRIM49-201ENST00000329758 MAST2Q6P0Q8 1798 aa8.05□□□□□ -1.12
TRIM49-201ENST00000329758 DUOX1Q9NRD9 1551 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 TSPY2A6NKD2 308 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CCDC169A6NNP5 214 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 STRNO43815 780 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 COBLO75128 1261 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 ASMTLO95671 621 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 EYA4O95677 639 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CYP1A1P04798 512 aaPredicted RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 ALDH2P05091 517 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 LYNP07948 512 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SPATA31D3P0C874 917 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 VDRP11473 427 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms