RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 TMEM253P0C7T8 217 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 PLTPP55058 493 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 ARHGEF19Q8IW93 802 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 SLC30A5Q8TAD4 765 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 TMEM39BQ9GZU3 492 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 A0A0A6YYK5 440 aaPredicted RBP15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 GOLGA6L10A0A0M3HER8 536 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 YDJCA8MPS7 323 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 MKNK1Q9BUB5 465 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 ERVK-5Q9HDB9 667 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 GPRC5CQ9NQ84 441 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 SEL1LQ9UBV2 794 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 COG5Q9UP83 839 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 BCRP11274 1271 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 DR1Q01658 176 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 PPP3CAQ08209 521 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 CETN1Q12798 172 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ITGB3BPQ13352 177 aaPredicted RBP15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 TNIP1Q15025 636 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 PTGISQ16647 500 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 DCAF12L1Q5VU92 463 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 DAW1Q8N136 415 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ALG3Q92685 438 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 CCT8L2Q96SF2 557 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 AGPAT1Q99943 283 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 GPR88Q9GZN0 384 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 EPN3Q9H201 632 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 SLITRK6Q9H5Y7 841 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 LARSQ9P2J5 1176 aaKnown RBP15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 INTUQ9ULD6 942 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 MYO1FO00160 1098 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ITGB5P18084 799 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 RXRBP28702 533 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 B4GALNT4Q76KP1 1039 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 RPUSD2Q8IZ73 545 aaKnown RBP15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 TTLL6Q8N841 843 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 IL31RAQ8NI17 732 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ALG6Q9Y672 507 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 C10orf71Q711Q0 1435 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 DCDC2CA8MYV0 355 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 VIL1P09327 827 aaKnown RBP15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ALAS1P13196 640 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ANXA13P27216 316 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 MARCKSL1P49006 195 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 VAMP7P51809 220 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 MAGOHP61326 146 aaKnown RBP15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 NLRP14Q86W24 1093 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 CD302Q8IX05 232 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ZNF473Q8WTR7 871 aaKnown RBP15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 MAGOHBQ96A72 148 aaKnown RBP15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 FMO2Q99518 471 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 KCNH7Q9NS40 1196 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 ODF2LQ9ULJ1 636 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 NENFQ9UMX5 172 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 DAAM1Q9Y4D1 1078 aa15.19■□□□□ 0.02
ATP2C1-201ENST00000328560 NFIBO00712 420 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 SLC16A4O15374 487 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 MYCLP12524 364 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 IFT88Q13099 833 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 SLC15A2Q16348 729 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 FBXW10Q5XX13 1052 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 RUFY4Q6ZNE9 571 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 RASGEF1CQ8N431 466 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 KRT35Q92764 455 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 LRRC4CQ9HCJ2 640 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 ANKRD62A6NC57 917 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 CCDC169A6NNP5 214 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 A6NNZ2 444 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 DDX3YO15523 660 aaKnown RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 PEX3P56589 373 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 TUBB8Q3ZCM7 444 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 ARFGAP2Q8N6H7 521 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 BTBD6Q96KE9 485 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 DMAC2Q9NW81 257 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 CAPN7Q9Y6W3 813 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 CLSTN1O94985 981 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 EIF2AK2P19525 551 aaKnown RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 SLC20A2Q08357 652 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 PPP2R5AQ15172 486 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 RSBN1LQ6PCB5 846 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 TMC3Q7Z5M5 1100 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 MXRA8Q9BRK3 442 aa15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 ZNF70Q9UC06 446 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-201ENST00000328560 ATP2C2O75185 946 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 NPEPPSP55786 919 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 MAPK7Q13164 816 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 DGKZQ13574 1117 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 NSMFQ6X4W1 530 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 FAM151AQ8WW52 585 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 C18orf8Q96DM3 657 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms