RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 JAG2Q9Y219 1238 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 AKAP10O43572 662 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 EPHB1P54762 984 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 MANFP55145 182 aaKnown RBP5.22□□□□□ -1.57
SKP1-201ENST00000328392 LGALS4P56470 323 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 CDK17Q00537 523 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 MOGSQ13724 837 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 EIF4HQ15056 248 aaKnown RBP5.22□□□□□ -1.57
SKP1-201ENST00000328392 PPP2R5AQ15172 486 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 CDSNQ15517 529 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 PITRM1Q5JRX3 1037 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 OTOP2Q7RTS6 562 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 TTC9BQ8N6N2 239 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 CALML6Q8TD86 181 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 CHMP4CQ96CF2 233 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 NEIL1Q96FI4 390 aaPredicted RBP5.22□□□□□ -1.57
SKP1-201ENST00000328392 FOXB1Q99853 325 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 SEC61A2Q9H9S3 476 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 CHPF2Q9P2E5 772 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 DPP7Q9UHL4 492 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 ZNF180Q9UJW8 692 aa5.22□□□□□ -1.57
SKP1-201ENST00000328392 PATE3B3GLJ2 98 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 MATN2O00339 956 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 FOXS1O43638 330 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 PCDHGA12O60330 932 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 CFBP00751 764 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 HMGCRP04035 888 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 ENPP1P22413 925 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 STAT5BP51692 787 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 PPARAQ07869 468 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 TRIM25Q14258 630 aaKnown RBP5.21□□□□□ -1.58
SKP1-201ENST00000328392 PUM1Q14671 1186 aaKnown RBP eCLIP5.21□□□□□ -1.581e-10■■□□□ 11.7
SKP1-201ENST00000328392 PCOLCEQ15113 449 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.21□□□□□ -1.58
SKP1-201ENST00000328392 ZXDCQ2QGD7 858 aaPredicted RBP5.21□□□□□ -1.58
SKP1-201ENST00000328392 INAVAQ3KP66 663 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 TMEM200BQ69YZ2 307 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 KIAA1841Q6NSI8 718 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 TCTN3Q6NUS6 607 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 ZNF585AQ6P3V2 769 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 DBX2Q6ZNG2 339 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 TAX1BP1Q86VP1 789 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 IFNL2Q8IZJ0 200 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 Q8TCH9 128 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 RPGRQ92834 1020 aaKnown RBP5.21□□□□□ -1.58
SKP1-201ENST00000328392 ACAP3Q96P50 834 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 C1QTNF3Q9BXJ4 246 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 KCTD10Q9H3F6 313 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 USP36Q9P275 1121 aaKnown RBP5.21□□□□□ -1.58
SKP1-201ENST00000328392 PCDHGA9Q9Y5G4 932 aaKnown RBP5.21□□□□□ -1.58
SKP1-201ENST00000328392 PCDHGA8Q9Y5G5 932 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 PCDHGA7Q9Y5G6 932 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 PCDHGA6Q9Y5G7 932 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 PCDHGA3Q9Y5H0 932 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 PCDHGA2Q9Y5H1 932 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 MRFAP1Q9Y605 127 aa5.21□□□□□ -1.58
SKP1-201ENST00000328392 A0A0G2JNJ9 132 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 KLHL33A6NCF5 533 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 K7ESF4 209 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 SCGB1D2O95969 90 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 APEX1P27695 318 aaKnown RBP5.2□□□□□ -1.58
SKP1-201ENST00000328392 PIN1Q13526 163 aaPredicted RBP5.2□□□□□ -1.58
SKP1-201ENST00000328392 FSCN1Q16658 493 aaKnown RBP5.2□□□□□ -1.58
SKP1-201ENST00000328392 TRIM68Q6AZZ1 485 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 GRAMD4Q6IC98 578 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 BCL6BQ8N143 479 aaPredicted RBP5.2□□□□□ -1.58
SKP1-201ENST00000328392 DVL3Q92997 716 aaPredicted RBP5.2□□□□□ -1.58
SKP1-201ENST00000328392 LRGUKQ96M69 825 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 DPYSL5Q9BPU6 564 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 NOL10Q9BSC4 688 aaKnown RBP5.2□□□□□ -1.58
SKP1-201ENST00000328392 RTFDC1Q9BY42 306 aaPredicted RBP5.2□□□□□ -1.58
SKP1-201ENST00000328392 KLC2Q9H0B6 622 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 Q9UFV3 132 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 FBXO10Q9UK96 956 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 NR2E1Q9Y466 385 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 MYPNQ86TC9 1320 aa5.2□□□□□ -1.58
SKP1-201ENST00000328392 FZD9O00144 591 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 ZNF623O75123 536 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 IL33O95760 270 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 PF4V1P10720 104 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 RBP3P10745 1247 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 ZSCAN20P17040 1043 aaPredicted RBP5.19□□□□□ -1.58
SKP1-201ENST00000328392 MRE11P49959 708 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 RAC3P60763 192 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 AGBL4Q5VU57 503 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 EFCAB2Q5VUJ9 269 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 TPH2Q8IWU9 490 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 PALM2Q8IXS6 379 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 GIMAP8Q8ND71 665 aaPredicted RBP5.19□□□□□ -1.58
SKP1-201ENST00000328392 JPH3Q8WXH2 748 aaPredicted RBP5.19□□□□□ -1.58
SKP1-201ENST00000328392 CFHR4Q92496 578 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 JADE3Q92613 823 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 DEF6Q9H4E7 631 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 DNAI1Q9UI46 699 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 OAZ3Q9UMX2 235 aa5.19□□□□□ -1.58
SKP1-201ENST00000328392 ARHGAP6O43182 974 aa5.18□□□□□ -1.58
SKP1-201ENST00000328392 PRPF3O43395 683 aaKnown RBP5.18□□□□□ -1.58
SKP1-201ENST00000328392 OPHN1O60890 802 aa5.18□□□□□ -1.58
SKP1-201ENST00000328392 BCAR1P56945 870 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms