RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 ZNF449Q6P9G9 518 aa15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 SRRM1Q8IYB3 904 aaKnown RBP15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 CYP2W1Q8TAV3 490 aa15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 WDR66Q8TBY9 1149 aa15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 MAGEC3Q8TD91 643 aa15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 PGM2Q96G03 612 aa15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 ARAP2Q8WZ64 1704 aa15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 AFF2P51816 1311 aa15.4■□□□□ 0.06
CHRNA3-201ENST00000326828 BTNL10A8MVZ5 291 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 STX2P32856 288 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 MSH2P43246 934 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 SLC12A3P55017 1021 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 SESN3P58005 492 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 COPS2P61201 443 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 LACTBP83111 547 aaPredicted RBP15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 C16orf86Q6ZW13 317 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 TAOK1Q7L7X3 1001 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 ATG4AQ8WYN0 398 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.06
CHRNA3-201ENST00000326828 FOXN3O00409 490 aaPredicted RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 PPP1R12AO14974 1030 aaPredicted RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 AGTP01019 485 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 ATP11AP98196 1134 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 CALCOCO2Q13137 446 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 KYNUQ16719 465 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 PRUNE1Q86TP1 453 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 NAP1L3Q99457 506 aaPredicted RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 TXLNGYQ9BZA5 131 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 PCIF1Q9H4Z3 704 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 EBF2Q9HAK2 575 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 HOMER3Q9NSC5 361 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 PCDHA1Q9Y5I3 950 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 ASTN1O14525 1302 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 ZNF335Q9H4Z2 1342 aaPredicted RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 NUDT17P0C025 328 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 PYGMP11217 842 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 COMTP21964 271 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 RPL13P26373 211 aaKnown RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 HOXA13P31271 388 aaPredicted RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 DDB1Q16531 1140 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 SHROOM1Q2M3G4 852 aaPredicted RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 ARHGAP27Q6ZUM4 889 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 SPIRE2Q8WWL2 714 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 ZNF622Q969S3 477 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 TGS1Q96RS0 853 aaKnown RBP15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 MTMR4Q9NYA4 1195 aa15.39■□□□□ 0.05
CHRNA3-201ENST00000326828 PFASO15067 1338 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 PNMA6FA0A0J9YX94 578 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 BRAFP15056 766 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 LMNB1P20700 586 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 PRKCIP41743 596 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 MARSP56192 900 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 GSTO1P78417 241 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 SEPT2Q15019 361 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 ANKRD20A2Q5SQ80 823 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 THEMIS2Q5TEJ8 643 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 ANKRD20A1Q5TYW2 823 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 ANKRD20A3Q5VUR7 823 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 SPATA21Q7Z572 469 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 TPH2Q8IWU9 490 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 CENPTQ96BT3 561 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 CFAP73A6NFT4 308 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 ATP2A2P16615 1042 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 GNPTABQ3T906 1256 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 MFSD14BQ5SR56 506 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 SEL1L2Q5TEA6 688 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 VSIG1Q86XK7 387 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 PARD3BQ8TEW8 1205 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 SEC14L1Q92503 715 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 RTFDC1Q9BY42 306 aaPredicted RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 CARD9Q9H257 536 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 CDC42EP4Q9H3Q1 356 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 ESYT2A0FGR8 921 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 LDHCP07864 332 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 ERFP50548 548 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 UBXN2AP68543 259 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 MPP2Q14168 576 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 UBE2TQ9NPD8 197 aaPredicted RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 ZMYND8Q9ULU4 1186 aaPredicted RBP15.38■□□□□ 0.05
CHRNA3-201ENST00000326828 GSTTP1A0A1W2PQM5 241 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 PHF2O75151 1096 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 SPAG7O75391 227 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 FAM13AO94988 1023 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 GSTA1P08263 222 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 TMEM253P0C7T8 217 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 VCAM1P19320 739 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 TARSP26639 723 aaKnown RBP15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 PCK1P35558 622 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 CHKAP35790 457 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 GJC1P36383 396 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 ZNF76P36508 570 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 JAM2P57087 298 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 UBL4BQ8N7F7 174 aa15.37■□□□□ 0.05
CHRNA3-201ENST00000326828 ARMC2Q8NEN0 867 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms