RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 BHMT2Q9H2M3 363 aa18.07■□□□□ 0.48
SSH1-201ENST00000326470 TAS2R14Q9NYV8 317 aa18.07■□□□□ 0.48
SSH1-201ENST00000326470 PCDHA3Q9Y5H8 950 aa18.07■□□□□ 0.48
SSH1-201ENST00000326470 PCDHA1Q9Y5I3 950 aa18.07■□□□□ 0.48
SSH1-201ENST00000326470 MIF4GDA9UHW6 222 aaKnown RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 EIF3DO15371 548 aaKnown RBP eCLIP18.06■□□□□ 0.48
SSH1-201ENST00000326470 CLTAP09496 248 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 SF3A3Q12874 501 aaKnown RBP eCLIP18.06■□□□□ 0.48
SSH1-201ENST00000326470 ZNF268Q14587 947 aaPredicted RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 SLMAPQ14BN4 828 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 CNGA2Q16280 664 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 QRICH1Q2TAL8 776 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 ACCSLQ4AC99 568 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 Q4G0T1 1027 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 FAM133BQ5BKY9 247 aaKnown RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 UBAP2Q5T6F2 1119 aaKnown RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 TBC1D1Q86TI0 1168 aaPredicted RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 PNMA8AQ86V59 439 aaPredicted RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 EPS8L3Q8TE67 593 aaKnown RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 MKNK1Q9BUB5 465 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 RASGRF2O14827 1237 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 RIPK2O43353 540 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 SNX3O60493 162 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 GAP43P17677 238 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 CTNNA2P26232 953 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 GBP2P32456 591 aaPredicted RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 PDE6CP51160 858 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 AUHQ13825 339 aaKnown RBP18.06■□□□□ 0.48
SSH1-201ENST00000326470 AADACL2Q6P093 401 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 TAOK1Q7L7X3 1001 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 ABCF3Q9NUQ8 709 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 DAGLAQ9Y4D2 1042 aa18.06■□□□□ 0.48
SSH1-201ENST00000326470 ZMYM2Q9UBW7 1377 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 MEIS2O14770 477 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 UFL1O94874 794 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 RARGP13631 454 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 MFSD5Q6N075 450 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 C11orf63Q6NUN7 778 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 PALB2Q86YC2 1186 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 UBL4BQ8N7F7 174 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 LENG9Q96B70 501 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 APEX2Q9UBZ4 518 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 AGAP1Q9UPQ3 857 aa18.05■□□□□ 0.48
SSH1-201ENST00000326470 EYA4O95677 639 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 OAS1P00973 400 aaKnown RBP18.04■□□□□ 0.48
SSH1-201ENST00000326470 RPSAP08865 295 aaKnown RBP18.04■□□□□ 0.48
SSH1-201ENST00000326470 ALAS1P13196 640 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 FGFR4P22455 802 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 SLCO1A2P46721 670 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 IFNAR2P48551 515 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 SLC8A3P57103 927 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 TTC27Q6P3X3 843 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 STAMBPL1Q96FJ0 436 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 RSRC1Q96IZ7 334 aaKnown RBP18.04■□□□□ 0.48
SSH1-201ENST00000326470 INTS2Q9H0H0 1204 aaKnown RBP18.04■□□□□ 0.48
SSH1-201ENST00000326470 SEPT11Q9NVA2 429 aaKnown RBP18.04■□□□□ 0.48
SSH1-201ENST00000326470 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 GGPS1O95749 300 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 KIF22Q14807 665 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 TCEAL1Q15170 157 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 CBWD6Q4V339 395 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 CBWD3Q5JTY5 395 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 CBWD5Q5RIA9 395 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 ZDHHC14Q8IZN3 488 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 UHMK1Q8TAS1 419 aaKnown RBP18.04■□□□□ 0.48
SSH1-201ENST00000326470 FAM20AQ96MK3 541 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 P2RX7Q99572 595 aaKnown RBP18.04■□□□□ 0.48
SSH1-201ENST00000326470 IKZF4Q9H2S9 585 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 RABGAP1Q9Y3P9 1069 aa18.04■□□□□ 0.48
SSH1-201ENST00000326470 ALADP13716 330 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 NQO1P15559 274 aaKnown RBP18.03■□□□□ 0.48
SSH1-201ENST00000326470 ATP2B4P23634 1241 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 SHMT1P34896 483 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 CYP4A11Q02928 519 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 CCDC137Q6PK04 289 aaKnown RBP18.03■□□□□ 0.48
SSH1-201ENST00000326470 MAB21L3Q8N8X9 362 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 KRT35Q92764 455 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 RUNDC3BQ96NL0 473 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 ZSWIM1Q9BR11 485 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 POLR3CQ9BUI4 534 aaPredicted RBP18.03■□□□□ 0.48
SSH1-201ENST00000326470 ROPN1BQ9BZX4 212 aaPredicted RBP18.03■□□□□ 0.48
SSH1-201ENST00000326470 ROPN1Q9HAT0 212 aaPredicted RBP18.03■□□□□ 0.48
SSH1-201ENST00000326470 TRPC5Q9UL62 973 aaPredicted RBP18.03■□□□□ 0.48
SSH1-201ENST00000326470 FOCADQ5VW36 1801 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 SFI1A8K8P3 1242 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 FAM86B1E9PN63 330 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 GNPATO15228 680 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 UBOX5O94941 541 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 FAM86B2P0C5J1 330 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 RARAP10276 462 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 NCALDP61601 193 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 CTTNQ14247 550 aaKnown RBP18.03■□□□□ 0.48
SSH1-201ENST00000326470 GALNTL6Q49A17 601 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 RINT1Q6NUQ1 792 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 ART4Q93070 314 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
SSH1-201ENST00000326470 HOMER3Q9NSC5 361 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms